RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 GABARAPL3Q9BY60 117 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 C12orf49Q9H741 205 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 RNF122Q9H9V4 155 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 TAS2R5Q9NYW4 299 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 TVP23BQ9NYZ1 205 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 RCE1Q9Y256 329 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 BSNQ9UPA5 3926 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 NBPF19A0A087WUL8 3843 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 NBASA2RRP1 2371 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 LOC102725191A0A1B0GVB3 256 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 NPIPB13A6NJU9 1138 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 EEF1E1-BLOC1S5C9J1V9 151 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 NPIPB4C9JG80 1138 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 MS4A18H0YCH9 400 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 H0YJX3 145 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 EEF1E1O43324 174 aaKnown RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 MPZL2O60487 215 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 SS18L1O75177 396 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 PTP4A3O75365 173 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 SNAP29O95721 258 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 TGM6O95932 706 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 APEHP13798 732 aaKnown RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 GNLYP22749 145 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 CTSSP25774 331 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 AGTR1P30556 359 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 HOXC12P31275 282 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 GRK5P34947 590 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 CENPAP49450 140 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 ZNF84P51523 738 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 RPS7P62081 194 aaKnown RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 H3F3AP84243 136 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 LGALS3BPQ08380 585 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 MS4A18Q3C1V0 323 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 SLC35F1Q5T1Q4 408 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 LEG1Q6P5S2 330 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 CREB3L2Q70SY1 520 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 IQCF1Q8N6M8 205 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 TMEM45BQ96B21 275 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 SLC25A44Q96H78 314 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 SLC29A1Q99808 456 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 PIGMQ9H3S5 423 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 RERGLQ9H628 205 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 BCO1Q9HAY6 547 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 MED29Q9NX70 200 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 ZNF346Q9UL40 294 aaKnown RBP11.53□□□□□ -0.56
PHGDH-218ENST00000641491 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 FLVCR1Q9Y5Y0 555 aa11.53□□□□□ -0.56
PHGDH-218ENST00000641491 BOD1L1Q8NFC6 3051 aa11.52□□□□□ -0.56
PHGDH-218ENST00000641491 IGKV3D-15A0A087WSY6 115 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 CENPBD1B2RD01 187 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF587BE7ETH6 402 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-218ENST00000641491 FZD7O75084 574 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 WISP2O76076 250 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 IGHMP01871 453 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 STSP08842 583 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-218ENST00000641491 GLI4P10075 376 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 CAPGP40121 348 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 GIPRP48546 466 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 AQP4P55087 323 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 IL5RAQ01344 420 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.52□□□□□ -0.57
PHGDH-218ENST00000641491 CAMK2DQ13557 499 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 PTGES3Q15185 160 aaKnown RBP11.52□□□□□ -0.57
PHGDH-218ENST00000641491 IGFBP7Q16270 282 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 PLXDC2Q6UX71 529 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 THSD4Q6ZMP0 1018 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 PTCHD4Q6ZW05 846 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ADGRE4PQ86SQ3 457 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 KIF18BQ86Y91 864 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ARIH2OSQ8N7S6 290 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 POMGNT2Q8NAT1 580 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 NOXO1Q8NFA2 376 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 OR52E2Q8NGJ4 325 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 OR6X1Q8NH79 312 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ASB5Q8WWX0 329 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ASB10Q8WXI3 467 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 TSPAN32Q96QS1 320 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF184Q99676 751 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ALG12Q9BV10 488 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 EMC6Q9BV81 110 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 PLA2G12AQ9BZM1 189 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 SLCO5A1Q9H2Y9 848 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 SLC25A19Q9HC21 320 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 NRIP3Q9NQ35 241 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 REV1Q9UBZ9 1251 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 TMEFF2Q9UIK5 374 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 FLNCQ14315 2725 aa11.52□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF716A6NP11 495 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF814B7Z6K7 855 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms