RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	MRPL24	Q96A35	216 aa	Known RBP	12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	ZNF837	Q96EG3	531 aa	Predicted RBP	12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	SYT3	Q9BQG1	590 aa		12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	MRPL39	Q9NYK5	338 aa	Known RBP	12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	GPR160	Q9UJ42	338 aa		12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	FBN3	Q75N90	2809 aa		12.69	□□□□□ -0.38
TARDBP-231	ENST00000639599	ZAN	Q9Y493	2812 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	IGKV1D-42	A0A075B6H8	117 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599		A0A0B4J2E0	115 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599		A0A1B0GX12	115 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	MT-ATP6	P00846	226 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	HIST1H2AB	P04908	130 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	UMPS	P11172	480 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	HLA-DOB	P13765	273 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	GIPR	P48546	466 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	EVX1	P49640	407 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	RAB1A	P62820	205 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	CYP51A1	Q16850	503 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	NKPD1	Q17RQ9	610 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	GLIPR1L2	Q4G1C9	344 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	LRIF1	Q5T3J3	769 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	SWT1	Q5T5J6	900 aa	Known RBP	12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	HIST3H2A	Q7L7L0	130 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	SLC26A7	Q8TE54	656 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	SNX33	Q8WV41	574 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	HIST1H2AC	Q93077	130 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	MS4A3	Q96HJ5	214 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	C7orf26	Q96N11	449 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	RABEP2	Q9H5N1	569 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	OCEL1	Q9H607	264 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	RNF121	Q9H920	327 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	DUSP13	Q9UII6	198 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	ZNF346	Q9UL40	294 aa	Known RBP	12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	GRIP1	Q9Y3R0	1128 aa		12.68	□□□□□ -0.38
TARDBP-231	ENST00000639599	ALPK2	Q86TB3	2170 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	ATR	Q13535	2644 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	ZNF503-AS2	A6NEH8	195 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599		B4DSR2	109 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	MS4A18	H0YCH9	400 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	RNF13	O43567	381 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	BGLAP	P02818	100 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	SAG	P10523	405 aa	Predicted RBP	12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	TCN1	P20061	433 aa	Predicted RBP	12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	GLRX	P35754	106 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	ALDH3B1	P43353	468 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	AQP5	P55064	265 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	CDH15	P55291	814 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	BID	P55957	195 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	MS4A18	Q3C1V0	323 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	AGK	Q53H12	422 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	PHYHD1	Q5SRE7	291 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	TTC33	Q6PID6	262 aa	Predicted RBP	12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	BLOC1S3	Q6QNY0	202 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	PXK	Q7Z7A4	578 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	SMYD1	Q8NB12	490 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	C11orf65	Q8NCR3	313 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	OR5J2	Q8NH18	312 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	SLC41A3	Q96GZ6	507 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	MCHR1	Q99705	422 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	TMEM43	Q9BTV4	400 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	CCDC28B	Q9BUN5	200 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	MRPL37	Q9BZE1	423 aa	Known RBP	12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	TMEM38A	Q9H6F2	299 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	NARFL	Q9H6Q4	476 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	CDH20	Q9HBT6	801 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	TMBIM4	Q9HC24	238 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	SLC25A37	Q9NYZ2	338 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	VAPA	Q9P0L0	249 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	SLC7A8	Q9UHI5	535 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	METRN	Q9UJH8	293 aa		12.67	□□□□□ -0.38
TARDBP-231	ENST00000639599	SLC22A23	A1A5C7	686 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	LYNX1	G3V0Z9	82 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	PLPP3	O14495	311 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	TPST1	O60507	370 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	LILRA1	O75019	489 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	FZD7	O75084	574 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	HPR	P00739	348 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	LYNX1	P0DP58	116 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	ACHE	P22303	614 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	MRPL19	P49406	292 aa	Known RBP	12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	DVL1P1	P54792	670 aa	Predicted RBP	12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	CDH12	P55289	794 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	TRIP10	Q15642	601 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	RGS7BP	Q6MZT1	257 aa	Predicted RBP	12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	TMEM53	Q6P2H8	277 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	ZNF613	Q6PF04	617 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	PIWIL3	Q7Z3Z3	882 aa	Known RBP	12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	RDH5	Q92781	318 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	ZNF566	Q969W8	418 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	TXNDC15	Q96J42	360 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	MOGAT1	Q96PD6	335 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	SOX7	Q9BT81	388 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	LRMDA	Q9H2I8	198 aa		12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	LEF1	Q9UJU2	399 aa	Predicted RBP	12.66	□□□□□ -0.38
TARDBP-231	ENST00000639599	COL6A5	A8TX70	2615 aa		12.65	□□□□□ -0.38
TARDBP-231	ENST00000639599	PLCE1	Q9P212	2302 aa		12.65	□□□□□ -0.38
TARDBP-231	ENST00000639599	TMEM129	A0AVI4	362 aa		12.65	□□□□□ -0.38
TARDBP-231	ENST00000639599	CPSF4L	A6NMK7	179 aa	Known RBP	12.65	□□□□□ -0.38
TARDBP-231	ENST00000639599	MCIDAS	D6RGH6	385 aa		12.65	□□□□□ -0.38

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