RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CCSO14618 274 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 NPPBP16860 134 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 KITLGP21583 273 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM176BQ3YBM2 270 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-213ENST00000638680 SLC48A1Q6P1K1 146 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 BRICD5Q6PL45 260 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 CCNL2Q96S94 520 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-213ENST00000638680 SMCO4Q9NRQ5 59 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 HBE1P02100 147 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 BDH1Q02338 343 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 OR52H1Q8NGJ2 320 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 GDE1Q9NZC3 331 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM129A0AVI4 362 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 UTS2O95399 124 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 FOLR1P15328 257 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 HNF4GQ14541 408 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 IAH1Q2TAA2 248 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF684Q5T5D7 378 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 PAQR6Q6TCH4 344 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 SYT9Q86SS6 491 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 OR5L1Q8NGL2 311 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 YIPF5Q969M3 257 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 ANKRD9Q96BM1 317 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF775Q96BV0 537 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-213ENST00000638680 TCTN2Q96GX1 697 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 PDCD1LG2Q9BQ51 273 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 P2RY12Q9H244 342 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 SULT1C4O75897 302 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 ZFAND5O76080 213 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 NPY4RP50391 375 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 TCRBV5S2A0A599 114 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 ATPAF1Q5TC12 328 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-213ENST00000638680 RBMS3Q6XE24 437 aaKnown RBP17.07■□□□□ 0.32
SCARB2-213ENST00000638680 MED25Q71SY5 747 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 SLC16A14Q7RTX9 510 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 C19orf47Q8N9M1 422 aaKnown RBP17.07■□□□□ 0.32
SCARB2-213ENST00000638680 C1QTNF3Q9BXJ4 246 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 WWTR1Q9GZV5 400 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 SLCO5A1Q9H2Y9 848 aa17.07■□□□□ 0.32
SCARB2-213ENST00000638680 CPEP16870 476 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 IKZF1Q13422 519 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF610Q8N9Z0 462 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 FGF13Q92913 245 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF578Q96N58 590 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 OBP2BQ9NPH6 170 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 NDUFB11Q9NX14 153 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 TMED7-TICAM2A0A0A6YYA0 188 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 LAMTOR5O43504 91 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 BCL6P41182 706 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 PXNP49023 591 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 SSTP61278 116 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 PMPCAQ10713 525 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 MFSD12Q6NUT3 480 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 NKAIN4Q8IVV8 208 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM217Q8N7C4 229 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 OR14A16Q8NHC5 309 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 DYNC2LI1Q8TCX1 351 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM43Q9BTV4 400 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 NKX6-2Q9C056 277 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 EXOSC3Q9NQT5 275 aaKnown RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 TMED7Q9Y3B3 224 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 A0A0A6YYJ9 748 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 NXPH3O95157 252 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF93P35789 620 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 RNLSQ5VYX0 342 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 OGFOD3Q6PK18 319 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 KANSL1Q7Z3B3 1105 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 HSD17B11Q8NBQ5 300 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 PHYHIPQ92561 330 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 UPRTQ96BW1 309 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF845Q96IR2 970 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 OR11A1Q9GZK7 315 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 RNF212BA8MTL3 300 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF195O14628 629 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 CA3P07451 260 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 BIDP55957 195 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 ERVFC1P60507 584 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 RNF4P78317 190 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 DUS3LQ96G46 650 aaKnown RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 GABARAPL3Q9BY60 117 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 RAB22AQ9UL26 194 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 CHST2Q9Y4C5 530 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 GLCEO94923 617 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 B3GALT4O96024 378 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 KIAA0907Q7Z7F0 614 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-213ENST00000638680 HSFX1Q9UBD0 423 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 NPFFR2Q9Y5X5 522 aa17.06■□□□□ 0.32
SCARB2-213ENST00000638680 SLC5A10A0PJK1 596 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 C17orf112F2Z3M2 114 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 PHF1O43189 567 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 CAMK2BQ13554 666 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 SLC35D3Q5M8T2 416 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 EID2Q8N6I1 236 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 DAZAP1Q96EP5 407 aaKnown RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 NKX3-1Q99801 234 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 SLC25A21Q9BQT8 299 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 DDAH2O95865 285 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 LGI1O95970 557 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms