RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 TAS2R5Q9NYW4 299 aa7.96□□□□□ -1.14
VCL-207ENST00000624354 TBC1D29Q9UFV1 150 aa7.96□□□□□ -1.14
VCL-207ENST00000624354 SPTBP11277 2137 aa7.96□□□□□ -1.14
VCL-207ENST00000624354 ANKRD20A5PA0PJZ0 165 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 DISC1C4P0D8 188 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 MCIDASD6RGH6 385 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ACOT7O00154 380 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 CTSVO60911 334 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ACAA1P09110 424 aaPredicted RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 KCNJ3P48549 501 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FHL1Q13642 323 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SERTAD2Q14140 314 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 UBXN2BQ14CS0 331 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 PRICKLE4Q2TBC4 344 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 C5orf46Q6UWT4 87 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 LRRN1Q6UXK5 716 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 TMEFF1Q8IYR6 380 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 OR14C36Q8NHC7 312 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 C2CD4CQ8TF44 421 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 OR2M4Q96R27 311 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 TSNAXQ99598 290 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 CMSS1Q9BQ75 279 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 SLITRK2Q9H156 845 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FGF22Q9HCT0 170 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 LYRM4Q9HD34 91 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 CA10Q9NS85 328 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FBXL3Q9UKT7 428 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 PCOLCE2Q9UKZ9 415 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ADAM18Q9Y3Q7 739 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 TRBV23OR9-2A0A075B6M9 112 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FXYD6-FXYD2A0A087WZ82 144 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 RAB19A4D1S5 217 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 GALR3O60755 368 aaPredicted RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 PRAMEF2O60811 474 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SMIM6P0DI80 62 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 IGFBP4P22692 258 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 PTH2RP49190 550 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 KIR2DS3Q14952 304 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 LINC00303Q3SY05 128 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SLC35D3Q5M8T2 416 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 OLFML2AQ68BL7 652 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ULK3Q6PHR2 472 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SLC35F3Q8IY50 421 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 OR10K1Q8NGX5 313 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 HMGB4Q8WW32 186 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 NMNAT3Q96T66 252 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 GFI1Q99684 422 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FXYD6Q9H0Q3 95 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 LMAN2LQ9H0V9 348 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 TCF7L1Q9HCS4 588 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 NIT2Q9NQR4 276 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 C2orf42Q9NWW7 574 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 EPHA6Q9UF33 1036 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ENTPD2Q9Y5L3 495 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SCN3AQ9NY46 2000 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SNRPGP15A8MWD9 76 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 EIF1BO60739 113 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 SPDEFO95238 335 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 HIST1H2ABP04908 130 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 IL5P05113 134 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 CT62P0C5K7 136 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 CALCBP10092 127 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ANXA7P20073 488 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 MAP3K8P41279 467 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 EIF1P41567 113 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 ACAA2P42765 397 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 EMDP50402 254 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ART1P52961 327 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SSTP61278 116 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 PPP2CBP62714 309 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 PPP2CAP67775 309 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ZNF626Q68DY1 528 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ZNF660Q6AZW8 331 aaPredicted RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 PWWP2BQ6NUJ5 590 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FAAP20Q6NZ36 180 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ZC3H14Q6PJT7 736 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 FIGLAQ6QHK4 219 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 HIST3H2AQ7L7L0 130 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 RELL2Q8NC24 303 aaPredicted RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 THEM6Q8WUY1 208 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 HIST1H2ACQ93077 130 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 RERGQ96A58 199 aaPredicted RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 HAVCR1Q96D42 359 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 CRB3Q9BUF7 120 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SLC25A32Q9H2D1 315 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SLC22A11Q9NSA0 550 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 ANKRD10Q9NXR5 420 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 DNAJB12Q9NXW2 375 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 MYEF2Q9P2K5 600 aaKnown RBP7.95□□□□□ -1.14
VCL-207ENST00000624354 OR5V1Q9UGF6 321 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 FOXJ3Q9UPW0 622 aa7.95□□□□□ -1.14
VCL-207ENST00000624354 SPTBN2O15020 2390 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 MUC22E2RYF6 1773 aaPredicted RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 UBE2QL1A1L167 161 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 PRSS38A1L453 326 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 IDSB3KWA1 339 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 PSMD9O00233 223 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 SLC31A1O15431 190 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 NKX2-2O95096 273 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 ZFPL1O95159 310 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms