RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 IGSF21Q96ID5 467 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 PRDM7Q9NQW5 492 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TMEM100Q9NV29 134 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 TIMM10BQ9Y5J6 103 aa7.27□□□□□ -1.25
VPS11-209ENST00000622309 RNF222A6NCQ9 220 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ANXA5P08758 320 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR4E1P0C645 316 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR1E1P30953 314 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PTGER3P43115 390 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 EFNB1P98172 346 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ZNF235Q14590 738 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 KHDC3LQ587J8 217 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 MESTQ5EB52 335 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 FRG2Q64ET8 278 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ZNF529Q6P280 563 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SERPINA13PQ6UXR4 307 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 GDPD4Q6W3E5 623 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 NXPE1Q8N323 547 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR4K1Q8NGD4 311 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ARRDC2Q8TBH0 407 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 LCN9Q8WX39 176 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PSMG2Q969U7 264 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SEC22AQ96IW7 307 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 FRG2BQ96QU4 278 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SLC32A1Q9H598 525 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 MRPL17Q9NRX2 175 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 TLX3O43711 291 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 PRICKLE3O43900 615 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 ARL6IP5O75915 188 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 MT-ND5P03915 603 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 CD74P04233 296 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 CRHP06850 196 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 STAG3L3P0CL85 134 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PTHLHP12272 177 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 DGKAP23743 735 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PRPH2P23942 346 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ACVRL1P37023 503 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TAF6P49848 677 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SULT1A1P50225 295 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SLC10A1Q14973 349 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 C14orf28Q4W4Y0 310 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 REEP3Q6NUK4 255 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 UBE2R2Q712K3 238 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 HIST2H3AQ71DI3 136 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 RNF175Q8N4F7 328 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ZNF610Q8N9Z0 462 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR2L8Q8NGY9 312 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 FBXO32Q969P5 355 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PTCHD1Q96NR3 888 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR2M4Q96R27 311 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PLA2G12AQ9BZM1 189 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 EPHX3Q9H6B9 360 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 IL21RQ9HBE5 538 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 GPATCH2Q9NW75 528 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ZNF337Q9Y3M9 751 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PLXNA1Q9UIW2 1896 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 LOC100509620A0A075B734 347 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3DA0A087WVF3 549 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ELOA3CA0A087WX78 387 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3IA0A087WXS9 549 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3EA0A087X179 549 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3KA0A087X1G2 549 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 A0A0B4J2A0 478 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3FA6NER0 549 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 TMEM210A6NLX4 147 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3LB9A6J9 549 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ZNF749O43361 778 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 GPR32O75388 356 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ADAP1O75689 374 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 CD8AP01732 235 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 IGHA1P01876 353 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 ANXA4P09525 319 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 S1PR1P21453 382 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SERPINF1P36955 418 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 AQP2P41181 271 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 CAMLGP49069 296 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 P2RX1P51575 399 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 HBA1P69905 142 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 LMAN2Q12907 356 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 GAGE1Q13065 139 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 CSRP2Q16527 193 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 NKPD1Q17RQ9 610 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 HENMT1Q5T8I9 393 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 PRAMEF20Q5VT98 475 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3CQ6IPX1 549 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 FBXO42Q6P3S6 717 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TMED4Q7Z7H5 227 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PEG10Q86TG7 708 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 MEX3DQ86XN8 651 aaKnown RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 TRAPPC5Q8IUR0 188 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SULF2Q8IWU5 870 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3Q8IZP1 549 aaPredicted RBP7.26□□□□□ -1.25
VPS11-209ENST00000622309 LINC00471Q8N535 108 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR10H4Q8NGA5 316 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR10AD1Q8NGE0 317 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 OR5R1Q8NH85 324 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PPP1R1CQ8WVI7 109 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 SMPDL3BQ92485 455 aa7.26□□□□□ -1.25
VPS11-209ENST00000622309 PHYHIPQ92561 330 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms