RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MOKQ9UQ07 419 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 IER3IP1Q9Y5U9 82 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 CABIN1Q9Y6J0 2220 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 TRAV18A0A075B6X5 111 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 PRRT4C9JH25 899 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 DOK2O60496 412 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 OLFM2O95897 454 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 SFTPBP07988 381 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 RABIFP47224 123 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 CXCL12P48061 93 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 NRG3P56975 720 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 NKPD1Q17RQ9 610 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 MRGPREQ86SM8 312 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF511Q8NB15 262 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 OR10K1Q8NGX5 313 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 STK35Q8TDR2 534 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 RLN3Q8WXF3 142 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 SLC25A28Q96A46 364 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 FOXN4Q96NZ1 517 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 APOOQ9BUR5 198 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 EVA1AQ9H8M9 152 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 SPHK1Q9NYA1 384 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 PTTG3PQ9NZH4 202 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF230Q9UIE0 474 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 NPFFR2Q9Y5X5 522 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 SPTA1P02549 2419 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 A0A0A6YYD5 115 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 BHLHE40O14503 412 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 KCNJ13O60928 360 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 HIST1H1CP16403 213 aaKnown RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 RAB28P51157 221 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 PRDX1Q06830 199 aaKnown RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ACSM1Q08AH1 577 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 CBFBQ13951 182 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 EXOSC7Q15024 291 aaKnown RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ABCA11PQ4W5N1 156 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 HAGHLQ6PII5 290 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 MAMSTRQ6ZN01 415 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 DEFB123Q8N688 67 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 OR5K2Q8NHB8 316 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 C2CD4CQ8TF44 421 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 MS4A6EQ96DS6 147 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 PARPBPQ9NWS1 579 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 SVILO95425 2214 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 KIAA1671Q9BY89 1806 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 TRAPPC13A5PLN9 417 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 KRBOX1C9JBD0 128 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PRAMEF26H0Y7S4 382 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 APBB3O95704 486 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 F12P00748 615 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 UGT2B7P16662 529 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CDK3Q00526 305 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SRSF5Q13243 272 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SMAD4Q13485 552 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF169Q14929 603 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MLF2Q15773 248 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CDNFQ49AH0 187 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 FAM76BQ5HYJ3 339 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 DMKNQ6E0U4 476 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 OR7E24Q6IFN5 339 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MRM1Q6IN84 353 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SEZ6L2Q6UXD5 910 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 GLDNQ6ZMI3 551 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 C12orf40Q86WS4 652 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 BEST3Q8N1M1 668 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 BVESQ8NE79 360 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 OR2A1Q8NGT9 310 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SP7Q8TDD2 431 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 FGF14Q92915 247 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MRGPRX3Q96LB0 322 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 INSM2Q96T92 566 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ARHGDIGQ99819 225 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ACTRT3Q9BYD9 372 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MTHFD2LQ9H903 347 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MEPEQ9NQ76 525 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 POLE3Q9NRF9 147 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CMC2Q9NRP2 79 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 LHX6Q9UPM6 363 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PLCL2Q9UPR0 1127 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CA5BQ9Y2D0 317 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SLC35A3Q9Y2D2 325 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ICE1Q9Y2F5 2266 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MED12Q93074 2177 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 A0A1W2PPV9 198 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF726A6NNF4 738 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 NPIPA5E9PKD4 350 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 C5orf67F2Z3F1 127 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 J3QRE1 110 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CCSO14618 274 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PIN1P1O15428 100 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MTRF1O75570 445 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ATG12O94817 140 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 VSIG10L2P0DP72 767 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 IFNGR1P15260 489 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 S1PR1P21453 382 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MAPK3P27361 379 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 FRKP42685 505 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 P2RX1P51575 399 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms