RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ZNF791Q3KP31 576 aaPredicted RBP19.4■□□□□ 0.7
SGMS1-210ENST00000619438 WBP2NLQ6ICG8 309 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 LIPHQ8WWY8 451 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 TIMP4Q99727 224 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 TM9SF2Q99805 663 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 SACM1LQ9NTJ5 587 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 PLEKHB1Q9UF11 243 aaPredicted RBP19.4■□□□□ 0.7
SGMS1-210ENST00000619438 SVILO95425 2214 aa19.39■□□□□ 0.7
SGMS1-210ENST00000619438 PTTG1O95997 202 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 HNRNPCP07910 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
SGMS1-210ENST00000619438 SBK2P0C263 348 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 CNR1P21554 472 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 RBPJQ06330 500 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 SKP2Q13309 424 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 KRTCAP3Q53RY4 240 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 SLC22A10Q63ZE4 541 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 ATP6V1C2Q8NEY4 427 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 OR5M3Q8NGP4 307 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 AP3S1Q92572 193 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 EFHD2Q96C19 240 aaPredicted RBP19.39■□□□□ 0.69
SGMS1-210ENST00000619438 SPACA9Q96E40 222 aaPredicted RBP19.39■□□□□ 0.69
SGMS1-210ENST00000619438 TMEM43Q9BTV4 400 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 ALG8Q9BVK2 526 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 NXF5Q9H1B4 397 aaKnown RBP19.39■□□□□ 0.69
SGMS1-210ENST00000619438 CMAHPQ9Y471 501 aa19.39■□□□□ 0.69
SGMS1-210ENST00000619438 G3V3Y1 287 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 SCDO00767 359 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 TO15178 435 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 UBL4AP11441 157 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 CELP19835 753 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 SDC2P34741 201 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 RPS4XP62701 263 aaKnown RBP19.38■□□□□ 0.69
SGMS1-210ENST00000619438 ACTC1P68032 377 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 ACTA1P68133 377 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 PLGLB1Q02325 96 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 NDUFAF6Q330K2 333 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 VASNQ6EMK4 673 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 DPY19L2P2Q6ZN68 376 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 NUP54Q7Z3B4 507 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 DND1Q8IYX4 353 aaKnown RBP19.38■□□□□ 0.69
SGMS1-210ENST00000619438 TMEM99Q8N816 258 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 SDHCQ99643 169 aaPredicted RBP19.38■□□□□ 0.69
SGMS1-210ENST00000619438 KATNB1Q9BVA0 655 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 C12orf10Q9HB07 376 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 ADGRL4Q9HBW9 690 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 RYDENQ9NUL5 291 aaKnown RBP19.38■□□□□ 0.69
SGMS1-210ENST00000619438 ZNF337Q9Y3M9 751 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 NPFFR2Q9Y5X5 522 aa19.38■□□□□ 0.69
SGMS1-210ENST00000619438 DAPL1A0PJW8 107 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 TFECO14948 347 aaPredicted RBP19.37■□□□□ 0.69
SGMS1-210ENST00000619438 ARPC3O15145 178 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 IDH3BO43837 385 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 OR7A10O76100 309 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 UTS2O95399 124 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 HPGDP15428 266 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 HNRNPA0Q13151 305 aaKnown RBP19.37■□□□□ 0.69
SGMS1-210ENST00000619438 KLHL12Q53G59 568 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 ATG4DQ86TL0 474 aaPredicted RBP19.37■□□□□ 0.69
SGMS1-210ENST00000619438 FAM83FQ8NEG4 500 aaPredicted RBP19.37■□□□□ 0.69
SGMS1-210ENST00000619438 GPX7Q96SL4 187 aaPredicted RBP19.37■□□□□ 0.69
SGMS1-210ENST00000619438 NEURL2Q9BR09 285 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 V9GYH0 126 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 HIVEP3Q5T1R4 2406 aa19.37■□□□□ 0.69
SGMS1-210ENST00000619438 CLEC18AA5D8T8 446 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 WISP2O76076 250 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 FBXO45P0C2W1 286 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 CCL3P10147 92 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 NOS3P29474 1203 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 TMED10P49755 219 aaKnown RBP19.36■□□□□ 0.69
SGMS1-210ENST00000619438 GGTLC2Q14390 218 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 CLEC18BQ6UXF7 455 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 KLBQ86Z14 1044 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZFP41Q8N8Y5 198 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZNF441Q8N8Z8 693 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 CLEC18CQ8NCF0 446 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 OR2M7Q8NG81 312 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 GPR137Q96N19 417 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ERMAPQ96PL5 475 aaPredicted RBP19.36■□□□□ 0.69
SGMS1-210ENST00000619438 FAM173AQ9BQD7 235 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 TRIM36Q9NQ86 728 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 DEPPQ9NTK1 212 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 SLC5A6Q9Y289 635 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 IGKV1D-42A0A075B6H8 117 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZC3H12DA2A288 527 aaKnown RBP19.36■□□□□ 0.69
SGMS1-210ENST00000619438 GABRPO00591 440 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 TP53I11O14683 189 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZNF264O43296 627 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 MT-ND5P03915 603 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 GTF2E2P29084 291 aaKnown RBP19.36■□□□□ 0.69
SGMS1-210ENST00000619438 TAS2R43P59537 309 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 DEFA1P59665 94 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 DEFA3P59666 94 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 PRPS1P60891 318 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 TRAM1Q15629 374 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 CD226Q15762 336 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.36■□□□□ 0.698e-9■■□□□ 13.4
SGMS1-210ENST00000619438 RNFT1Q5M7Z0 435 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 B3GLCTQ6Y288 498 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 PRR22Q8IZ63 422 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZFP62Q8NB50 900 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms