RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 NAGSQ8N159 534 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 GATSQ8NAP1 163 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 OR5A2Q8NGI9 324 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 PPP1R35Q8TAP8 253 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 RPL10LQ96L21 214 aaKnown RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 RBM14Q96PK6 669 aaKnown RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 TINAGL1Q9GZM7 467 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ST8SIA3O43173 380 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 PIP5KL1Q5T9C9 394 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 CLECL1Q8IZS7 167 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ABHD4Q8TB40 342 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 F5H5K5 113 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 OTOP2Q7RTS6 562 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 FAM210BQ96KR6 192 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 TAAR9Q96RI9 348 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 NUDT22Q9BRQ3 303 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 C19orf25Q9UFG5 118 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF814B7Z6K7 855 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 RNASET2O00584 256 aaKnown RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 IRAK2O43187 625 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 STK19P49842 368 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 Q5PR19 223 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 FAM24BQ8N5W8 94 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 OR8D4Q8NGM9 314 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 FIBINQ8TAL6 211 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 IL22RA2Q969J5 263 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 PADI1Q9ULC6 663 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 CFAP20Q9Y6A4 193 aaKnown RBP13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ASGR2P07307 311 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 ADRA2CP18825 462 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 OR9A2Q8NGT5 310 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 RSRP1Q9BUV0 290 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 FER1L4A9Z1Z3 1794 aa13.98□□□□□ -0.17
COL5A1-208ENST00000618395 DBX1A6NMT0 343 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 DNPH1O43598 174 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CLEC4CQ8WTT0 213 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CMBLQ96DG6 245 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 SORT1Q99523 831 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 HRASLSQ9HDD0 168 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 IER3IP1Q9Y5U9 82 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CLDN7O95471 211 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 NXF5Q9H1B4 397 aaKnown RBP13.97□□□□□ -0.17
COL5A1-208ENST00000618395 SLC35B3Q9H1N7 401 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 G3V2L1 256 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 OR2J2O76002 312 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CBX7O95931 251 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF26P17031 533 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-208ENST00000618395 OR1D2P34982 312 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 SAXO2Q658L1 398 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CATSPERDQ86XM0 798 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 TRIB1Q96RU8 372 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 RNF24Q9Y225 148 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 LCATP04180 440 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 GPX3P22352 226 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ACAA2P42765 397 aaKnown RBP13.97□□□□□ -0.17
COL5A1-208ENST00000618395 KCNJ3P48549 501 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 TCTAP57738 103 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ID2Q02363 134 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CRMP1Q14194 572 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 GPR18Q14330 331 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 OVCH1Q7RTY7 1134 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 OR51A4Q8NGJ6 313 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ADCYAP1R1P41586 468 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 LILRA4P59901 499 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 APH1AQ96BI3 265 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 OR14J1Q9UGF5 321 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 TMEM11P17152 192 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 IGFBP4P22692 258 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 FAM189BP81408 668 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 GPR137CQ8N3F9 429 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 SDR9C7Q8NEX9 313 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 GHSRQ92847 366 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF337Q9Y3M9 751 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 LEUTXA8MZ59 168 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 RAB29O14966 203 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 CPNE6O95741 557 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ACP5P13686 325 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 ZNF718Q3SXZ3 478 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 MAML2Q8IZL2 1156 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-208ENST00000618395 HRASLS5Q96KN8 279 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 IER2Q9BTL4 223 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 NECAP2Q9NVZ3 263 aa13.97□□□□□ -0.17
COL5A1-208ENST00000618395 GLTPD2A6NH11 291 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 AQP7P3A6NL99 342 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 SSSCA1O60232 199 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 AQP8O94778 261 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 OR2T7P0C7T2 308 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 RPL12P30050 165 aaKnown RBP13.96□□□□□ -0.17
COL5A1-208ENST00000618395 LCTLQ6UWM7 567 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 M0QYG6 137 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 ACHEP22303 614 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 F2RP25116 425 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 GSK3AP49840 483 aa13.96□□□□□ -0.17
COL5A1-208ENST00000618395 FOXB2Q5VYV0 432 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms