RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GPN1Q9HCN4 374 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-216ENST00000610401 MRM2Q9UI43 246 aaKnown RBP18.6■□□□□ 0.57
SSBP3-216ENST00000610401 DCDC2BA2VCK2 349 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 CYR61O00622 381 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 ICAM2P13598 275 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 NHLRC3Q5JS37 347 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 C1QL3Q5VWW1 255 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 ULK3Q6PHR2 472 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 ZNF524Q96C55 264 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 GAS2L1Q99501 681 aaPredicted RBP18.59■□□□□ 0.57
SSBP3-216ENST00000610401 ATG5Q9H1Y0 275 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 PPA2Q9H2U2 334 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 NPDC1Q9NQX5 325 aaPredicted RBP18.59■□□□□ 0.57
SSBP3-216ENST00000610401 BAIAP2Q9UQB8 552 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 EGFP01133 1207 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 GAAP10253 952 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 MEP1BQ16820 701 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 FAM69AQ5T7M9 428 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 CGGBP1Q9UFW8 167 aaPredicted RBP18.59■□□□□ 0.57
SSBP3-216ENST00000610401 SESN1Q9Y6P5 492 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 FREM2Q5SZK8 3169 aa18.59■□□□□ 0.57
SSBP3-216ENST00000610401 A0A1B0GUH1 482 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 SLC22A23A1A5C7 686 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 LINC01553A4QN01 128 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 OR5K3A6NET4 321 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 IFNGR1P15260 489 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 GRK6P43250 576 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 POU4F2Q12837 409 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 KCTD20Q7Z5Y7 419 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 GPAT4Q86UL3 456 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 DND1Q8IYX4 353 aaKnown RBP18.58■□□□□ 0.57
SSBP3-216ENST00000610401 RSC1A1Q92681 617 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 ATXN7L1Q9ULK2 861 aaPredicted RBP18.58■□□□□ 0.57
SSBP3-216ENST00000610401 ASXL3Q9C0F0 2248 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 ANKRD20A5PA0PJZ0 165 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 TGFBR3LH3BV60 316 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 MGAT2Q10469 447 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 SLC51BQ86UW2 128 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 CD163Q86VB7 1156 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 FGF14Q92915 247 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 ANKRD9Q96BM1 317 aaPredicted RBP18.58■□□□□ 0.57
SSBP3-216ENST00000610401 TRIM2Q9C040 744 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 MFFQ9GZY8 342 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 KCNG2Q9UJ96 466 aa18.58■□□□□ 0.57
SSBP3-216ENST00000610401 PPM1BO75688 479 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 AKR7A3O95154 331 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 WISP1O95388 367 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 TGM6O95932 706 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 HNRNPA1P09651 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF10P21506 573 aaPredicted RBP18.58■□□□□ 0.56
SSBP3-216ENST00000610401 ARHGAP40Q5TG30 622 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF776Q68DI1 518 aaPredicted RBP18.58■□□□□ 0.56
SSBP3-216ENST00000610401 NPSR1Q6W5P4 371 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 ADGRG3Q86Y34 549 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF563Q8TA94 476 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 GAL3ST4Q96RP7 486 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 TMEM185BQ9H7F4 350 aa18.58■□□□□ 0.56
SSBP3-216ENST00000610401 SOX1O00570 391 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-216ENST00000610401 ECDO95905 644 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-216ENST00000610401 COL9A1P20849 921 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 POU3F4P49335 361 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 SLC6A19Q695T7 634 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 PARM1Q6UWI2 310 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 GSG1LQ6UXU4 331 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 CA13Q8N1Q1 262 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 FITM1A5D6W6 292 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 ACOT7O00154 380 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 RPS4Y1P22090 263 aaKnown RBP18.57■□□□□ 0.56
SSBP3-216ENST00000610401 TAF13Q15543 124 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 CSRP2Q16527 193 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 ALG10Q5BKT4 473 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 PM20D2Q8IYS1 436 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 SAMD14Q8IZD0 417 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-216ENST00000610401 SLC25A28Q96A46 364 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 TAS2R5Q9NYW4 299 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 AKAP7Q9P0M2 348 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-216ENST00000610401 CABIN1Q9Y6J0 2220 aa18.57■□□□□ 0.56
SSBP3-216ENST00000610401 CA3P07451 260 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 ST6GAL1P15907 406 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF28P17035 718 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 FOXL2P58012 376 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 CD226Q15762 336 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 ETFDHQ16134 617 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 OR6V1Q8N148 313 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF321PQ8N8H1 164 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 OR4S1Q8NGB4 309 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 PDCD10Q9BUL8 212 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 MRTO4Q9UKD2 239 aaKnown RBP18.56■□□□□ 0.56
SSBP3-216ENST00000610401 PLEKHA6Q9Y2H5 1048 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 F5H5P2 479 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 TRIM77I1YAP6 450 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 Q499Y3 187 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 TMEM196Q5HYL7 178 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF626Q68DY1 528 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 POMGNT2Q8NAT1 580 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 HAVCR1Q96D42 359 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 REG4Q9BYZ8 158 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 OPN4Q9UHM6 478 aa18.56■□□□□ 0.56
SSBP3-216ENST00000610401 GSTZ1O43708 216 aaPredicted RBP18.56■□□□□ 0.56
SSBP3-216ENST00000610401 ALKBH1Q13686 389 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms