RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 EXOSC3Q9NQT5 275 aaKnown RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 RBFOX1Q9NWB1 397 aaKnown RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 H0YGG7 62 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 HTR1FP30939 366 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 MARCH8Q5T0T0 291 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 HBMQ6B0K9 141 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 OR13C9Q8NGT0 318 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 C11orf54Q9H0W9 315 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 XRCC3O43542 346 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 GSK3AP49840 483 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 LPCAT3Q6P1A2 487 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 C14orf79Q96F83 325 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 DCLRE1CQ96SD1 692 aaKnown RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 DUSP23Q9BVJ7 150 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 BLACEA4D250 179 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 EMP3P54852 163 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 GLYATL3Q5SZD4 288 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 TMEM255BQ8WV15 326 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 TMEM235A6NFC5 223 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 ETV6P41212 452 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 STT3BQ8TCJ2 826 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 F6UZH7 168 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 SLC31A2O15432 143 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 CR2P20023 1033 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 SLC5A2P31639 672 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 KIAA1024LP59773 190 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 FLI1Q01543 452 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 SYT9Q86SS6 491 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 OR6C1Q96RD1 312 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 SLC6A17Q9H1V8 727 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 DECR2Q9NUI1 292 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
USP6NL-205ENST00000609104 MOKQ9UQ07 419 aa12.11□□□□□ -0.47
USP6NL-205ENST00000609104 NXPH2O95156 264 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 HNF1AP20823 631 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ALKBH1Q13686 389 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 C15orf54Q8N8G6 183 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 GPR78Q96P69 363 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ACSS1Q9NUB1 689 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 HS3ST1O14792 307 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 CPT2P23786 658 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 FCN2Q15485 313 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 HNRNPA1L2Q32P51 320 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ARFGAP1Q8N6T3 406 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 FAM173AQ9BQD7 235 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 DDX60Q8IY21 1712 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 UTS2O95399 124 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 TCEAL8Q8IYN2 117 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 BATF2Q8N1L9 274 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 PBX4Q9BYU1 374 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 KCPQ6ZWJ8 1503 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 EFSO43281 561 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 GPRIN2O60269 458 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 APEX1P27695 318 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 KCNRGQ8N5I3 272 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 CLEC2DQ9UHP7 191 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 CD46P15529 392 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 SEC22CQ9BRL7 303 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 NAGAP17050 411 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 NFYBP25208 207 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ZNF266Q14584 549 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 SSX9Q7RTT3 188 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 CNTN4Q8IWV2 1026 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ZNF595Q8IYB9 648 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 NXT1Q9UKK6 140 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 SRPK3Q9UPE1 567 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 TIGD3Q6B0B8 471 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 FAM111BQ6SJ93 734 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 LURAP1Q96LR2 239 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ETV7Q9Y603 341 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 PRRC2BQ5JSZ5 2229 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 TIMP1P01033 207 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 GRPP07492 148 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ZDHHC11BP0C7U3 371 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ZNF865P0CJ78 1059 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 PRDX1Q06830 199 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 ARHGAP11BQ3KRB8 267 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
USP6NL-205ENST00000609104 MFSD9Q8NBP5 474 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 KCNJ15Q99712 375 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
USP6NL-205ENST00000609104 SELENOFO60613 162 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms