RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 MT-ATP6P00846 226 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF35P13682 527 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 DAOP14920 347 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF14P17017 642 aaPredicted RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF16P17020 682 aaPredicted RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF23P17027 643 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 IGFBP5P24593 272 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 THBS2P35442 1172 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 PCBP3P57721 371 aaKnown RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 POU3F1Q03052 451 aaPredicted RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 RBBP4Q09028 425 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 CAMK2DQ13557 499 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 DAG1Q14118 895 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 SELPLGQ14242 412 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 NPTX1Q15818 432 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 TTMPQ5BVD1 217 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ENTPD8Q5MY95 495 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 FAM120AOSQ5T036 256 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 SWT1Q5T5J6 900 aaKnown RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 FAM166AQ6J272 317 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 KRT80Q6KB66 452 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF813Q6ZN06 617 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 RETREG3Q86VR2 466 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 RANBP3LQ86VV4 465 aaPredicted RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 CDK20Q8IZL9 346 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF786Q8N393 782 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 DPP10Q8N608 796 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 C11orf65Q8NCR3 313 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 GPR32P1Q8NGA4 272 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 OR6T1Q8NGN1 323 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 OR6N1Q8NGY5 312 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 OR5J2Q8NH18 312 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 DYDC1Q8WWB3 177 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 CKAP2Q8WWK9 683 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 STON2Q8WXE9 905 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 THOC1Q96FV9 657 aaKnown RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 MS4A3Q96HJ5 214 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 CGREF1Q99674 301 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ARHGDIGQ99819 225 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 REPIN1Q9BWE0 567 aaKnown RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 DENND2DQ9H6A0 471 aaPredicted RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF385DQ9H6B1 395 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 NOX3Q9HBY0 568 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 B3GAT2Q9NPZ5 323 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 INTS9Q9NV88 658 aaKnown RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 TAS2R5Q9NYW4 299 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 ZNF224Q9NZL3 707 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 LEF1Q9UJU2 399 aaPredicted RBP6.58□□□□□ -1.36
CUX1-219ENST00000606749 KCNS2Q9ULS6 477 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 POFUT2Q9Y2G5 429 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 NDUFAF1Q9Y375 327 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 CMAHPQ9Y471 501 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 COL6A5A8TX70 2615 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 MALRD1Q5VYJ5 2156 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 LRP5LA4QPB2 252 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 CPSF4LA6NMK7 179 aaKnown RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 C11orf98E9PRG8 122 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 CHP2O43745 196 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 LILRA1O75019 489 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 SERPINI2O75830 405 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 CH25HO95992 272 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 TGFAP01135 160 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 OPN1SWP03999 348 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 THY1P04216 161 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 ERCC1P07992 297 aaPredicted RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 ADRA2AP08913 450 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 TACSTD2P09758 323 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 ADORA3P0DMS8 318 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 IFNGR1P15260 489 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 B4GALT1P15291 398 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 SRD5A1P18405 259 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 PTDSS1P48651 473 aaKnown RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 EVX1P49640 407 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 GZMMP51124 257 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 BIDP55957 195 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 MTPNP58546 118 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 RAB1AP62820 205 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 ZP4Q12836 540 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 SNTB2Q13425 540 aaKnown RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 RIN1Q13671 783 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 ZNF74Q16587 644 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 CYP51A1Q16850 503 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 MSMPQ1L6U9 139 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 GSG1Q2KHT4 349 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 TTC33Q6PID6 262 aaPredicted RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 LRFN4Q6PJG9 635 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 WDR88Q6ZMY6 472 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 PIWIL3Q7Z3Z3 882 aaKnown RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 DHDDSQ86SQ9 333 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 TSPYL5Q86VY4 417 aaPredicted RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 SNX32Q86XE0 403 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 RBM45Q8IUH3 476 aaKnown RBP6.57□□□□□ -1.36
CUX1-219ENST00000606749 SKA3Q8IX90 412 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 LRRC17Q8N6Y2 441 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 OR4D11Q8NGI4 311 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 OR6X1Q8NH79 312 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 FGFBP3Q8TAT2 258 aa6.57□□□□□ -1.36
CUX1-219ENST00000606749 ADAMTS16Q8TE57 1224 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms