RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ANKRD16Q6P6B7 361 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 PRSS57Q6UWY2 283 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 DEF8Q6ZN54 512 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 TMPRSS11FQ6ZWK6 438 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 SLC35D2Q76EJ3 337 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 ARHGAP24Q8N264 748 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 UBE2J2Q8N2K1 259 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 ACOT11Q8WXI4 607 aaPredicted RBP7.67□□□□□ -1.18
SSBP4-208ENST00000600628 NEUROG1Q92886 237 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 MUCL1Q96DR8 90 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 SLC25A44Q96H78 314 aaPredicted RBP7.67□□□□□ -1.18
SSBP4-208ENST00000600628 TPD52L3Q96J77 140 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 RADILQ96JH8 1075 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 ADAD1Q96M93 576 aaKnown RBP7.67□□□□□ -1.18
SSBP4-208ENST00000600628 CDRT15Q96T59 188 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 C1orf21Q9H246 121 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 NMNAT1Q9HAN9 279 aaPredicted RBP7.67□□□□□ -1.18
SSBP4-208ENST00000600628 MED29Q9NX70 200 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 EGFL7Q9UHF1 273 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 RPS6KA6Q9UK32 745 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 CSPG4Q6UVK1 2322 aa7.67□□□□□ -1.18
SSBP4-208ENST00000600628 TCRBV5S2A0A599 114 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CIB4A0PJX0 185 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CDC42EP2O14613 210 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 ARPC2O15144 300 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 AKAP8O43823 692 aaKnown RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 PIP5K1CO60331 668 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 SMPD2O60906 423 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 PTP4A3O75365 173 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 ZNF682O95780 498 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CD3EP07766 207 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 SOD3P08294 240 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 IFNGR1P15260 489 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 NQO1P15559 274 aaKnown RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 FUT1P19526 365 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MAKP20794 623 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 GTF2E2P29084 291 aaKnown RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MAGEA2P43356 314 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 LIMS1P48059 325 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MNAT1P51948 309 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 HMGA2P52926 109 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 NKX6-1P78426 367 aaPredicted RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 ARF1P84077 181 aaKnown RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 RUNX1T1Q06455 604 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 FOXD4Q12950 439 aaPredicted RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 TRAM2Q15035 370 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CEACAM16Q2WEN9 425 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 NRN1LQ496H8 165 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 HIKESHIQ53FT3 197 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 SHEQ5VZ18 495 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 B3GLCTQ6Y288 498 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 DNM1P46Q6ZS02 220 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MBOAT2Q6ZWT7 520 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 PIWIL3Q7Z3Z3 882 aaKnown RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CCDC36Q8IYA8 594 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 DEFB107AQ8IZN7 70 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 RNF148Q8N7C7 305 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CCDC197Q8NCU1 140 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 WFDC11Q8NEX6 87 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 KBTBD8Q8NFY9 601 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 OR52N5Q8NH56 324 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 ASB10Q8WXI3 467 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 AKAP1Q92667 903 aaKnown RBP eCLIP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 BPIFA2Q96DR5 249 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 SGTBQ96EQ0 304 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 NSL1Q96IY1 281 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CCL19Q99731 98 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 EMC6Q9BV81 110 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 CRLF2Q9HC73 371 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 NDE1Q9NXR1 346 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 TAS2R1Q9NYW7 299 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 ACTR3BQ9P1U1 418 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MAGEL2Q9UJ55 1249 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MGAT4BQ9UQ53 548 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MED31Q9Y3C7 131 aa7.66□□□□□ -1.18
SSBP4-208ENST00000600628 MAGED1Q9Y5V3 778 aaPredicted RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 YLPM1P49750 1951 aaKnown RBP7.66□□□□□ -1.18
SSBP4-208ENST00000600628 IGHV1-18A0A0C4DH31 117 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 E7EQL1 145 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 KPNA4O00629 521 aaPredicted RBP7.65□□□□□ -1.18
SSBP4-208ENST00000600628 ABCD4O14678 606 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 CLOCKO15516 846 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 ARHGEF9O43307 516 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 FOSL1P15407 271 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 CBR1P16152 277 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 CALB2P22676 271 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 MSX2P35548 267 aaPredicted RBP7.65□□□□□ -1.18
SSBP4-208ENST00000600628 AQP2P41181 271 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 OMPP47874 163 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 SLC9A3P48764 834 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 FXYD6P3P58550 94 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 PRPS1P60891 318 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 SPOCK1Q08629 439 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 CAMK2DQ13557 499 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 C1DQ13901 141 aaKnown RBP7.65□□□□□ -1.18
SSBP4-208ENST00000600628 LAPTM4AQ15012 233 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 SEC23BQ15437 767 aa7.65□□□□□ -1.18
SSBP4-208ENST00000600628 TAF11Q15544 211 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms