RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FGFR1OP2Q9NVK5 253 aa11.78□□□□□ -0.52
SHKBP1-208ENST00000595726 PDP1Q9P0J1 537 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-208ENST00000595726 LEF1Q9UJU2 399 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-208ENST00000595726 OSGIN1Q9UJX0 560 aa11.78□□□□□ -0.52
SHKBP1-208ENST00000595726 TRAPPC4Q9Y296 219 aa11.78□□□□□ -0.52
SHKBP1-208ENST00000595726 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
SHKBP1-208ENST00000595726 TMED7-TICAM2A0A0A6YYA0 188 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 ARPC4-TTLL3A0A0A6YYG9 625 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 A0A0G2JMP0 313 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 A0A0X1KG70 313 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 SYNGR3O43761 229 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 FSHBP01225 129 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 UQCRBP14927 111 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 MDKP21741 143 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 TACR3P29371 465 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 ACAA2P42765 397 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 MVKQ03426 396 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 SNTB2Q13425 540 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 DAG1Q14118 895 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 LARS2Q15031 903 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 HSP90B2PQ58FF3 399 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 GCNT6Q5T4J0 391 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 METTL21CQ5VZV1 264 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 LEG1Q6P5S2 330 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 RBMS3Q6XE24 437 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 DHDDSQ86SQ9 333 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 RETREG3Q86VR2 466 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 LRP11Q86VZ4 500 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 CLIP4Q8N3C7 705 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 DPP10Q8N608 796 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 TMEM99Q8N816 258 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 OR9K2Q8NGE7 335 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 NFKBIDQ8NI38 313 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 TMEM45BQ96B21 275 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 ALKBH3Q96Q83 286 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 SYT3Q9BQG1 590 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 NAA11Q9BSU3 229 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 SPATA9Q9BWV2 254 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 CORO2BQ9UQ03 480 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 IFT52Q9Y366 437 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 NDUFAF1Q9Y375 327 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 TMED7Q9Y3B3 224 aa11.77□□□□□ -0.53
SHKBP1-208ENST00000595726 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 TMEM72A0PK05 275 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 ZC3H12DA2A288 527 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 C5orf58C9J3I9 102 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 M0R233 179 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 ANGPT2O15123 496 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 ZNF208O43345 1280 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 EIF1BO60739 113 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 UPK3AO75631 287 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 RP2O75695 350 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 NCR1O76036 304 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 AKR7A3O95154 331 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 IGKV3-15P01624 115 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 PRG2P13727 222 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 ETS2P15036 469 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 ANPEPP15144 967 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 GPX2P18283 190 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 OMGP23515 440 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 CLK1P49759 484 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 SELENOPP49908 381 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 SLC35A1P78382 337 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 IL13RA1P78552 427 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 GUCY1A3Q02108 690 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 NPRL3Q12980 569 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 OCLNQ16625 522 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 RUNDC3AQ59EK9 446 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 OTUD3Q5T2D3 398 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 SERPINA11Q86U17 422 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 TSPEARQ8WU66 669 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 RSPO3Q9BXY4 272 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 SLITRK2Q9H156 845 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 CCDC134Q9H6E4 229 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 TMEM38AQ9H6F2 299 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 CACYBPQ9HB71 228 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 NOX3Q9HBY0 568 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 CRLF2Q9HC73 371 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 MYEF2Q9P2K5 600 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 FZR1Q9UM11 496 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 ZNF232Q9UNY5 417 aa11.76□□□□□ -0.53
SHKBP1-208ENST00000595726 EVPLLA8MZ36 301 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 TMEM229AB2RXF0 380 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 ZNF587BE7ETH6 402 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 FRS3O43559 492 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 CDC14BO60729 498 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 CBR1P16152 277 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 MAP2K6P52564 334 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 CDK6Q00534 326 aa11.75□□□□□ -0.53
SHKBP1-208ENST00000595726 SF3A3Q12874 501 aaKnown RBP eCLIP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms