RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	CD79A	P11912	226 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	PPOX	P50336	477 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	PIGF	Q07326	219 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	NFYC	Q13952	458 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	NPTX1	Q15818	432 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	IQCC	Q4KMZ1	466 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	ENTPD8	Q5MY95	495 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	ZNF813	Q6ZN06	617 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	HDX	Q7Z353	690 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	SPATA21	Q7Z572	469 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	RBM45	Q8IUH3	476 aa	Known RBP	13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	SVOPL	Q8N434	492 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	STON2	Q8WXE9	905 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	DOK1	Q99704	481 aa		13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	KAT8	Q9H7Z6	458 aa	Known RBP	13.92	□□□□□ -0.18
CIRBP-240	ENST00000592815	MXRA5	Q9NR99	2828 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815		A0A0G2JND7	137 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	TMEM129	A0AVI4	362 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	RNF212B	A8MTL3	300 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	CHP2	O43745	196 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	OR6A2	O95222	327 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	CH25H	O95992	272 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	FAM157C	P0CG43	387 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	ADORA3	P0DMS8	318 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	IFNGR1	P15260	489 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	ZNF16	P17020	682 aa	Predicted RBP	13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	GZMK	P49863	264 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	DAG1	Q14118	895 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	GSG1	Q2KHT4	349 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	KRT80	Q6KB66	452 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	PATL1	Q86TB9	770 aa	Known RBP	13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	SNX32	Q86XE0	403 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	OR4D11	Q8NGI4	311 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	OR5J2	Q8NH18	312 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	OR10A6	Q8NH74	314 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	TSPEAR	Q8WU66	669 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	MS4A3	Q96HJ5	214 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	ULBP2	Q9BZM5	246 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	NOX3	Q9HBY0	568 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	TMEM160	Q9NX00	188 aa		13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	FBXO9	Q9UK97	447 aa	Predicted RBP	13.91	□□□□□ -0.18
CIRBP-240	ENST00000592815	IGHV4-61	A0A0C4DH41	118 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	LOC100289279	A0A1B0GTE1	492 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	LMX1B	O60663	402 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	EDF1	O60869	148 aa	Known RBP	13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	LYPD3	O95274	346 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	THY1	P04216	161 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	ERCC1	P07992	297 aa	Predicted RBP	13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	APEH	P13798	732 aa	Known RBP	13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	B4GALT1	P15291	398 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	CD247	P20963	164 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	NR4A1	P22736	598 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	CSNK1A1	P48729	337 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	BID	P55957	195 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	SNTB2	Q13425	540 aa	Known RBP	13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	TTC33	Q6PID6	262 aa	Predicted RBP	13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	WDR88	Q6ZMY6	472 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	ZNF627	Q7L945	461 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	SLC30A8	Q8IWU4	369 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	ARIH2OS	Q8N7S6	290 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	ZNF540	Q8NDQ6	660 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	SLC26A7	Q8TE54	656 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	ADAMTS16	Q8TE57	1224 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	TAMM41	Q96BW9	452 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	SHARPIN	Q9H0F6	387 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	TAS2R5	Q9NYW4	299 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	CMAHP	Q9Y471	501 aa		13.9	□□□□□ -0.18
CIRBP-240	ENST00000592815	TRAPPC13	A5PLN9	417 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	KPNA4	O00629	521 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	ADRA2A	P08913	450 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	DAO	P14920	347 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	PCGF2	P35227	344 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	GIPR	P48546	466 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	PTDSS1	P48651	473 aa	Known RBP	13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	RAB1A	P62820	205 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF74	Q16587	644 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	METTL21C	Q5VZV1	264 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	SLC35D2	Q76EJ3	337 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	CDK20	Q8IZL9	346 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	LRRC17	Q8N6Y2	441 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	NEU4	Q8WWR8	484 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	MSI2	Q96DH6	328 aa	Known RBP	13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	FOXB1	Q99853	325 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	BPESC1	Q9GZL8	116 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	VIPAS39	Q9H9C1	493 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	DYNLRB1	Q9NP97	96 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	NANS	Q9NR45	359 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	LPAR3	Q9UBY5	353 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	SLC7A7	Q9UM01	511 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	SPEF1	Q9Y4P9	236 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	STAB1	Q9NY15	2570 aa		13.89	□□□□□ -0.19
CIRBP-240	ENST00000592815	FBP2	O00757	339 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	RNF13	O43567	381 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	STAMBP	O95630	424 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	RAB36	O95755	333 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	HIST1H2AB	P04908	130 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms