RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR6A2O95222 327 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 IFNA14P01570 189 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 UMPSP11172 480 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 PCSK6P29122 969 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 KDELR2P33947 212 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 CAPZA2P47755 286 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 IDH3GP51553 393 aaPredicted RBP12.06□□□□□ -0.48
APOC1-208ENST00000592535 UGT2B15P54855 530 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 BIDP55957 195 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 TAS2R41P59536 307 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 KRTAP1-1Q07627 177 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 ZP4Q12836 540 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 NPRL3Q12980 569 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 MST1LQ2TV78 715 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 CYBRD1Q53TN4 286 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 SLC35D2Q76EJ3 337 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 SLC46A3Q7Z3Q1 461 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 MDP1Q86V88 176 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 MICU2Q8IYU8 434 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 RP9Q8TA86 221 aaKnown RBP12.06□□□□□ -0.48
APOC1-208ENST00000592535 FBXO17Q96EF6 278 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 ULBP2Q9BZM5 246 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 SLC19A3Q9BZV2 496 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
APOC1-208ENST00000592535 B3GAT2Q9NPZ5 323 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 ZNF229Q9UJW7 825 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 NSD1Q96L73 2696 aaPredicted RBP12.06□□□□□ -0.48
APOC1-208ENST00000592535 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
APOC1-208ENST00000592535 ELOVL7A1L3X0 281 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 RNF13O43567 381 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 OR5F1O95221 314 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 ASAH2BP0C7U1 165 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 COX4I1P13073 169 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 CSNK1A1P48729 337 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 PIN1Q13526 163 aaPredicted RBP12.05□□□□□ -0.48
APOC1-208ENST00000592535 MELKQ14680 651 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 RAB35Q15286 201 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 SWI5Q1ZZU3 235 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 VHLLQ6RSH7 139 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 NANOGNBQ7Z5D8 188 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 SLC15A3Q8IY34 581 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 PFN4Q8NHR9 129 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 TMEM255BQ8WV15 326 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 TMEM54Q969K7 222 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 TPD52L3Q96J77 140 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 NOX3Q9HBY0 568 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 CA10Q9NS85 328 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 RIMS3Q9UJD0 308 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 POFUT2Q9Y2G5 429 aa12.05□□□□□ -0.48
APOC1-208ENST00000592535 YLPM1P49750 1951 aaKnown RBP12.05□□□□□ -0.48
APOC1-208ENST00000592535 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 CCDC22O60826 627 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 HLA-HP01893 362 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 MT-ND1P03886 318 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 HIST1H2ABP04908 130 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 BMP4P12644 408 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 B4GALT1P15291 398 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 ARR3P36575 388 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 RBM34P42696 430 aaKnown RBP12.04□□□□□ -0.48
APOC1-208ENST00000592535 HGFACQ04756 655 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 HIST3H2AQ7L7L0 130 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 ZNF627Q7L945 461 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 ARPINQ7Z6K5 226 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 TREML1Q86YW5 311 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 ZNF525Q8N782 197 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 OR6X1Q8NH79 312 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 HIST1H2ACQ93077 130 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 FOXB1Q99853 325 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 RHNO1Q9BSD3 238 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 POLR2J2Q9GZM3 115 aaKnown RBP12.04□□□□□ -0.48
APOC1-208ENST00000592535 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
APOC1-208ENST00000592535 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 B3GNT2Q9NY97 397 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 GLTPQ9NZD2 209 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 PMF1-BGLAPU3KQ54 211 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 CHD3Q12873 2000 aaKnown RBP12.04□□□□□ -0.48
APOC1-208ENST00000592535 ZANQ9Y493 2812 aa12.04□□□□□ -0.48
APOC1-208ENST00000592535 ABCA1O95477 2261 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 NIPBLQ6KC79 2804 aaeCLIP12.03□□□□□ -0.48
APOC1-208ENST00000592535 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 BLOC1S5-TXNDC5H3BN57 136 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 NME4O00746 187 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 OR7A10O76100 309 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 LY6HO94772 140 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 OR4A8P0C604 315 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 CD79AP11912 226 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 FUT1P19526 365 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 SERPINF1P36955 418 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 SLC7A2P52569 658 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 EFNA4P52798 201 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 GYS2P54840 703 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 SELENOWP63302 87 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 LIPEQ05469 1076 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 RPL18Q07020 188 aaKnown RBP12.03□□□□□ -0.48
APOC1-208ENST00000592535 PIGFQ07326 219 aa12.03□□□□□ -0.48
APOC1-208ENST00000592535 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms