RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	REP15	Q6BDI9	236 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	KRT80	Q6KB66	452 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	ZNF613	Q6PF04	617 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	ZNF786	Q8N393	782 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	ARIH2OS	Q8N7S6	290 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	HPS1	Q92902	700 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	ZNF837	Q96EG3	531 aa	Predicted RBP	18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	MCHR1	Q99705	422 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	MS4A5	Q9H3V2	200 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	LEF1	Q9UJU2	399 aa	Predicted RBP	18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	MXRA5	Q9NR99	2828 aa		18.24	■□□□□ 0.51
TMC6-213	ENST00000589933	FMO6P	O60774	539 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	UBL3	O95164	117 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	HLA-H	P01893	362 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	ADORA3	P0DMS8	318 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	IFNGR1	P15260	489 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	PCMT1	P22061	227 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	NR4A1	P22736	598 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	CSNK1A1	P48729	337 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	EVX1	P49640	407 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	CDH12	P55289	794 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	RBBP4	Q09028	425 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	CAMK2D	Q13557	499 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	CYP51A1	Q16850	503 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	LIPN	Q5VXI9	398 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	SLC30A8	Q8IWU4	369 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	OR5J2	Q8NH18	312 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	FOXB1	Q99853	325 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	SLCO1B3	Q9NPD5	702 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	MED29	Q9NX70	200 aa		18.23	■□□□□ 0.51
TMC6-213	ENST00000589933	TRBV5-3	A0A0A0MS03	114 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933		M0R233	179 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	SYNGR3	O43761	229 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	SERPINI2	O75830	405 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	HPR	P00739	348 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	HIST1H2AB	P04908	130 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	ADRA2A	P08913	450 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	HLA-DOB	P13765	273 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	B4GALT1	P15291	398 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	PTDSS1	P48651	473 aa	Known RBP	18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	PIGF	Q07326	219 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	HIST3H2A	Q7L7L0	130 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	ZNF627	Q7L945	461 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	MYPOP	Q86VE0	399 aa	Predicted RBP	18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	SLC26A7	Q8TE54	656 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	HIST1H2AC	Q93077	130 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	MRPL24	Q96A35	216 aa	Known RBP	18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	MOGAT1	Q96PD6	335 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	B3GNT2	Q9NY97	397 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	TRIM33	Q9UPN9	1127 aa		18.22	■□□□□ 0.51
TMC6-213	ENST00000589933	PLPP3	O14495	311 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	ANGPT2	O15123	496 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	CHP2	O43745	196 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	MFN2	O95140	757 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	TACSTD2	P09758	323 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	APEX1	P27695	318 aa	Known RBP	18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	GLRX	P35754	106 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	RUNDC3A	Q59EK9	446 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	PHYHD1	Q5SRE7	291 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	TTC33	Q6PID6	262 aa	Predicted RBP	18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	PIWIL3	Q7Z3Z3	882 aa	Known RBP	18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	COMTD1	Q86VU5	262 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	LINC01356	Q8N9X3	169 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	TXNDC15	Q96J42	360 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	REV1	Q9UBZ9	1251 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	NDUFAF1	Q9Y375	327 aa		18.21	■□□□□ 0.51
TMC6-213	ENST00000589933	TMEM129	A0AVI4	362 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	LRP5L	A4QPB2	252 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF503-AS2	A6NEH8	195 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	C11orf98	E9PRG8	122 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	FARS2	O95363	451 aa	Known RBP	18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	BID	P55957	195 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	RAB1A	P62820	205 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	CR1L	Q2VPA4	569 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	INTS11	Q5TA45	600 aa	Known RBP	18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	IL17REL	Q6ZVW7	336 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	DHDDS	Q86SQ9	333 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	PATL1	Q86TB9	770 aa	Known RBP	18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	CDK20	Q8IZL9	346 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	C10orf111	Q8N326	155 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	SMYD1	Q8NB12	490 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	RASSF5	Q8WWW0	418 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	CPPED1	Q9BRF8	314 aa	Predicted RBP	18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	IKZF5	Q9H5V7	419 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC52A3	Q9NQ40	469 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	NANS	Q9NR45	359 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	GPR160	Q9UJ42	338 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933	FBN3	Q75N90	2809 aa		18.2	■□□□□ 0.5
TMC6-213	ENST00000589933		M0QX08	132 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933		M0R3H8	397 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF14	P17017	642 aa	Predicted RBP	18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	SRP14	P37108	136 aa	Known RBP	18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	GIPR	P48546	466 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	SELENOV	P59797	346 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	ZCCHC24	Q8N2G6	241 aa	Known RBP	18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	OR6X1	Q8NH79	312 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	ATP6V1G3	Q96LB4	118 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	RSPO3	Q9BXY4	272 aa	Predicted RBP	18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	TPK1	Q9H3S4	243 aa		18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC7A8	Q9UHI5	535 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms