RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CACNG2Q9Y698 323 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF208O43345 1280 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 AMY2AP04746 511 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 CPEP16870 476 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 FAM69AQ5T7M9 428 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 ASCC1Q8N9N2 400 aaKnown RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 C17orf47Q8NEP4 570 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 FLRT3Q9NZU0 649 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 KCNG2Q9UJ96 466 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 PTPRDP23468 1912 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 TBX19O60806 448 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 LALBAP00709 142 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 ENDOUP21128 410 aaKnown RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 SSTR2P30874 369 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 GPLD1P80108 840 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 C17orf67Q0P5P2 114 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 OR10K2Q6IF99 312 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 BATF2Q8N1L9 274 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 DVL3Q92997 716 aaPredicted RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 DPCDQ9BVM2 203 aaPredicted RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 PCDHGA3Q9Y5H0 932 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 LRRC28Q86X40 367 aaPredicted RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 DOCK7Q96N67 2140 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 AICDAQ9GZX7 198 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 S1PR5Q9H228 398 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 PPIL3Q9H2H8 161 aaKnown RBP13.3□□□□□ -0.28
RETREG3-208ENST00000589797 LIN7BQ9HAP6 207 aa13.3□□□□□ -0.28
RETREG3-208ENST00000589797 TRAV36DV7A0A075B6V5 113 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 TEX51A0A1B0GUA7 166 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 P2RY10O00398 339 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 LCATP04180 440 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 CASP3P42574 277 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 CRYBB2P43320 205 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 POLR2HP52434 150 aaKnown RBP13.29□□□□□ -0.28
RETREG3-208ENST00000589797 CLDN17P56750 224 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 DCAF7P61962 342 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 AWAT2Q6E213 333 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 COX15Q7KZN9 410 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 FBXO8Q9NRD0 319 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 MAN2C1Q9NTJ4 1040 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 KDM4BO94953 1096 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 PRSS3P35030 304 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 HBMQ6B0K9 141 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 APOOLQ6UXV4 268 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 DCXRQ7Z4W1 244 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF584Q8IVC4 421 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 BRIX1Q8TDN6 353 aaKnown RBP13.29□□□□□ -0.28
RETREG3-208ENST00000589797 CDCP1Q9H5V8 836 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 IGHV3-15A0A0B4J1V0 119 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 OR6C68A6NDL8 312 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 AKR1C4P17516 323 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 SRMP19623 302 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 DPP4P27487 766 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 ABCD3P28288 659 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
RETREG3-208ENST00000589797 ABHD17BQ5VST6 288 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 GPR139Q6DWJ6 353 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 IFI44Q8TCB0 444 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 SLC41A2Q96JW4 573 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 DOK1Q99704 481 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 APMAPQ9HDC9 416 aa13.29□□□□□ -0.28
RETREG3-208ENST00000589797 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
RETREG3-208ENST00000589797 A8MVM7 634 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 L7N2F9 121 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 FOXS1O43638 330 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 TMEM225BP0DP42 221 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 TPBGQ13641 420 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 ZMYND11Q15326 602 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 P4HA3Q7Z4N8 544 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 C3orf49Q96BT1 292 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 WDR76Q9H967 626 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 EMC7Q9NPA0 242 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 DNAJB12Q9NXW2 375 aaKnown RBP13.28□□□□□ -0.28
RETREG3-208ENST00000589797 KCND3Q9UK17 655 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SATB2Q9UPW6 733 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 A0A0B4J2E0 115 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 A0A1B0GX12 115 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 GLCEO94923 617 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 WNT1P04628 370 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 ARSBP15848 533 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 LTBQ06643 244 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 PUDPQ08623 228 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 WDR88Q6ZMY6 472 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 YRDCQ86U90 279 aaKnown RBP13.28□□□□□ -0.28
RETREG3-208ENST00000589797 PTP4A1Q93096 173 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 TRMT61AQ96FX7 289 aaKnown RBP13.28□□□□□ -0.28
RETREG3-208ENST00000589797 RNF170Q96K19 258 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SIAEQ9HAT2 523 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 HHLA2Q9UM44 414 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 UGT2A1Q9Y4X1 527 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 H0YIG0 161 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SULT1C4O75897 302 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 GDF1P27539 372 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
RETREG3-208ENST00000589797 HIST1H2AAQ96QV6 131 aa13.28□□□□□ -0.28
RETREG3-208ENST00000589797 METTL8Q9H825 291 aaKnown RBP13.28□□□□□ -0.28
RETREG3-208ENST00000589797 SLC25A19Q9HC21 320 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms