RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ST6GALNAC3Q8NDV1 305 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 ZNF519Q8TB69 540 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 ABHD3Q8WU67 409 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 LRR1Q96L50 414 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 Q96M85 177 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 ZNF696Q9H7X3 374 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 HINT3Q9NQE9 182 aaKnown RBP13.29□□□□□ -0.28
NFIX-208ENST00000587260 TINAGQ9UJW2 476 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 TEX13CA0A0J9YWL9 993 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 M0R3G1 203 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 SLC1A7O00341 560 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 TGM6O95932 706 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 LYNP07948 512 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 HLA-DOBP13765 273 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 CRHBPP24387 322 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 DAP3P51398 398 aaKnown RBP13.29□□□□□ -0.28
NFIX-208ENST00000587260 POU3F1Q03052 451 aaPredicted RBP13.29□□□□□ -0.28
NFIX-208ENST00000587260 TLE1Q04724 770 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.29□□□□□ -0.28
NFIX-208ENST00000587260 ITGADQ13349 1161 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 SMN1Q16637 294 aaKnown RBP13.29□□□□□ -0.28
NFIX-208ENST00000587260 NXNL2Q5VZ03 156 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 FAM205BPQ63HN1 556 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 ABLIM2Q6H8Q1 611 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 SLC35D2Q76EJ3 337 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 P4HA3Q7Z4N8 544 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 UEVLDQ8IX04 471 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 RPRMLQ8N4K4 120 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 NPEPL1Q8NDH3 523 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 OR52E2Q8NGJ4 325 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 OR4K13Q8NH42 304 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 ZPLD1Q8TCW7 415 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 RNF128Q8TEB7 428 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 PTP4A1Q93096 173 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 CLCF1Q9UBD9 225 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 GPR52Q9Y2T5 361 aa13.29□□□□□ -0.28
NFIX-208ENST00000587260 COL6A6A6NMZ7 2263 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 MAGEA13PA6NCF6 341 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 SNTNA6NMZ2 147 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 AHRRA9YTQ3 701 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 PRODHO43272 600 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 TRAF3IP2O43734 574 aaPredicted RBP13.28□□□□□ -0.28
NFIX-208ENST00000587260 AHCYL1O43865 530 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 WDR1O75083 606 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 ENTPD6O75354 484 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 C1QL1O75973 258 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 BCL10O95999 233 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 ACVR2AP27037 513 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 FMO3P31513 532 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
NFIX-208ENST00000587260 SLC16A1P53985 500 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 MRPL49Q13405 166 aaKnown RBP13.28□□□□□ -0.28
NFIX-208ENST00000587260 CRMP1Q14194 572 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 SLC17A1Q14916 467 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
NFIX-208ENST00000587260 MESTQ5EB52 335 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 CXXC5Q7LFL8 322 aaKnown RBP13.28□□□□□ -0.28
NFIX-208ENST00000587260 CPOQ8IVL8 374 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 ZNF843Q8N446 348 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 RASD2Q96D21 266 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 ZNF582Q96NG8 517 aaPredicted RBP13.28□□□□□ -0.28
NFIX-208ENST00000587260 NMNAT2Q9BZQ4 307 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 DUSP21Q9H596 190 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 BLOC1S6Q9UL45 172 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 CLEC4AQ9UMR7 237 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 ZNF835Q9Y2P0 537 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 FAM215AQ9Y5M1 114 aa13.28□□□□□ -0.28
NFIX-208ENST00000587260 A6NIZ1 184 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 CYTIPO60759 359 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 RPSAP08865 295 aaKnown RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 GABRA1P14867 456 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 IFNGR1P15260 489 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 ZNF43P17038 809 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 PAICSP22234 425 aaKnown RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 SLC15A1P46059 708 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 SLC25A1P53007 311 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 GABARAPL2P60520 117 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 RAP1BP61224 184 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 RAP1AP62834 184 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 RASGEF1BQ0VAM2 473 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 TMED1Q13445 227 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 KRR1Q13601 381 aaKnown RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 MELKQ14680 651 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 EEF1A1P5Q5VTE0 462 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 RTL6Q6ICC9 239 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 PLBD1Q6P4A8 553 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 CREB3L2Q70SY1 520 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 HDDC2Q7Z4H3 204 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 ADGRE4PQ86SQ3 457 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 DOLPP1Q86YN1 238 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 GID4Q8IVV7 300 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 C9orf106Q8NAJ2 232 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 RFKQ969G6 155 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms