RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ANKRD27Q96NW4 1050 aa17.69■□□□□ 0.42
TOP3A-219ENST00000584887 BPESC1Q9GZL8 116 aa17.69■□□□□ 0.42
TOP3A-219ENST00000584887 NOX3Q9HBY0 568 aa17.69■□□□□ 0.42
TOP3A-219ENST00000584887 TMEM160Q9NX00 188 aa17.69■□□□□ 0.42
TOP3A-219ENST00000584887 MRPL39Q9NYK5 338 aaKnown RBP17.69■□□□□ 0.42
TOP3A-219ENST00000584887 CPSF4LA6NMK7 179 aaKnown RBP17.68■□□□□ 0.42
TOP3A-219ENST00000584887 ANGPT2O15123 496 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 OR6A2O95222 327 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 IGFBP5P24593 272 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 SELPLGQ14242 412 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 GSG1Q2KHT4 349 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 RUNDC3AQ59EK9 446 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 PTOV1Q86YD1 416 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 CDK20Q8IZL9 346 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 VANGL1Q8TAA9 524 aaPredicted RBP17.68■□□□□ 0.42
TOP3A-219ENST00000584887 CKAP2Q8WWK9 683 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 MS4A3Q96HJ5 214 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 TMEM43Q9BTV4 400 aa17.68■□□□□ 0.42
TOP3A-219ENST00000584887 INTS9Q9NV88 658 aaKnown RBP17.68■□□□□ 0.42
TOP3A-219ENST00000584887 FBN3Q75N90 2809 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 PLPP3O14495 311 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 ADORA3P0DMS8 318 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 DAOP14920 347 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 PTDSS1P48651 473 aaKnown RBP17.67■□□□□ 0.42
TOP3A-219ENST00000584887 CSNK1A1P48729 337 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 NFYCQ13952 458 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 SWT1Q5T5J6 900 aaKnown RBP17.67■□□□□ 0.42
TOP3A-219ENST00000584887 SNX32Q86XE0 403 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 WDFY1Q8IWB7 410 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 IL17RDQ8NFM7 739 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 MSI2Q96DH6 328 aaKnown RBP17.67■□□□□ 0.42
TOP3A-219ENST00000584887 CGREF1Q99674 301 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 ARHGDIGQ99819 225 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 EVA1AQ9H8M9 152 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 FBXO9Q9UK97 447 aaPredicted RBP17.67■□□□□ 0.42
TOP3A-219ENST00000584887 NDUFAF1Q9Y375 327 aa17.67■□□□□ 0.42
TOP3A-219ENST00000584887 M0QX08 132 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 SRD5A1P18405 259 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 BIDP55957 195 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 PCBP3P57721 371 aaKnown RBP17.66■□□□□ 0.42
TOP3A-219ENST00000584887 ZNF613Q6PF04 617 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 PXKQ7Z7A4 578 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 ZNF540Q8NDQ6 660 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 OR6T1Q8NGN1 323 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 OR5J2Q8NH18 312 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 LRR1Q96L50 414 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 DOK1Q99704 481 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 TPK1Q9H3S4 243 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 CMAHPQ9Y471 501 aa17.66■□□□□ 0.42
TOP3A-219ENST00000584887 LRP5LA4QPB2 252 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 KPNA4O00629 521 aaPredicted RBP17.65■□□□□ 0.42
TOP3A-219ENST00000584887 CHP2O43745 196 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 FMO6PO60774 539 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 STAMBPO95630 424 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 RAB36O95755 333 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 CH25HO95992 272 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 MT-ATP6P00846 226 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 TGFAP01135 160 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 ADRA2AP08913 450 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 IFNGR1P15260 489 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 ZNF23P17027 643 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 GIPRP48546 466 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 RBBP4Q09028 425 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 NPTX1Q15818 432 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 DUSP7Q16829 419 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 TRMT5Q32P41 509 aaKnown RBP17.65■□□□□ 0.42
TOP3A-219ENST00000584887 ENTPD8Q5MY95 495 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 GKAP1Q5VSY0 366 aaPredicted RBP17.65■□□□□ 0.42
TOP3A-219ENST00000584887 RETREG3Q86VR2 466 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 GPR32P1Q8NGA4 272 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 SLC26A7Q8TE54 656 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 NEU4Q8WWR8 484 aaPredicted RBP17.65■□□□□ 0.42
TOP3A-219ENST00000584887 FOXB1Q99853 325 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 NPHS2Q9NP85 383 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 B3GNT2Q9NY97 397 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 TRIM33Q9UPN9 1127 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 SPEF1Q9Y4P9 236 aa17.65■□□□□ 0.42
TOP3A-219ENST00000584887 TMEM129A0AVI4 362 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 HNF1AP20823 631 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 NR4A1P22736 598 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 FAM120AOSQ5T036 256 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 WDR88Q6ZMY6 472 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 RBM45Q8IUH3 476 aaKnown RBP17.64■□□□□ 0.41
TOP3A-219ENST00000584887 DPP10Q8N608 796 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 SLC7A7Q9UM01 511 aa17.64■□□□□ 0.41
TOP3A-219ENST00000584887 RNF13O43567 381 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 UMPSP11172 480 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 GALK2Q01415 458 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 MELKQ14680 651 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 TTC33Q6PID6 262 aaPredicted RBP17.63■□□□□ 0.41
TOP3A-219ENST00000584887 NHLRC1Q6VVB1 395 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 SLC35D2Q76EJ3 337 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 PATL1Q86TB9 770 aaKnown RBP17.63■□□□□ 0.41
TOP3A-219ENST00000584887 ADAMTS16Q8TE57 1224 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 UBASH3BQ8TF42 649 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 TAMM41Q96BW9 452 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 MAGEB18Q96M61 343 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 SNX18Q96RF0 628 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 SYT3Q9BQG1 590 aa17.63■□□□□ 0.41
TOP3A-219ENST00000584887 MRPL37Q9BZE1 423 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms