RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PTOV1Q86YD1 416 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 C1QL4Q86Z23 238 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 SMYD1Q8NB12 490 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 OR10H5Q8NGA6 315 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 OR4F15Q8NGB8 312 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 ZFAND2BQ8WV99 257 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 FAM168AQ92567 244 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 FBXO17Q96EF6 278 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 THOC1Q96FV9 657 aaKnown RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 SLC41A3Q96GZ6 507 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 OR2M2Q96R28 347 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 MCHR1Q99705 422 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 PRR14Q9BWN1 585 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 NELFAQ9H3P2 528 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF385DQ9H6B1 395 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 CRLF2Q9HC73 371 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 GPR35Q9HC97 309 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 B3GAT2Q9NPZ5 323 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 FBXO9Q9UK97 447 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-206ENST00000584112 NOX1Q9Y5S8 564 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 FKBP7Q9Y680 259 aa9.66□□□□□ -0.86
CCDC47-206ENST00000584112 A0A0G2JND7 137 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 VSTM5A8MXK1 200 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 B9A039 149 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 M0QX08 132 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CHP2O43745 196 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 MT-ATP6P00846 226 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 IGLV1-44P01699 117 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 BGLAPP02818 100 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CECR9P0C854 216 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CBR1P16152 277 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CBLP22681 906 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.86
CCDC47-206ENST00000584112 ARR3P36575 388 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CDH12P55289 794 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 MTPNP58546 118 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 TUBA1BP68363 451 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 TUBA4AP68366 448 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 POU3F1Q03052 451 aaPredicted RBP9.65□□□□□ -0.86
CCDC47-206ENST00000584112 LOXL1Q08397 574 aaPredicted RBP9.65□□□□□ -0.86
CCDC47-206ENST00000584112 PUDPQ08623 228 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 PMS2P3Q13401 168 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 SWI5Q1ZZU3 235 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CEACAM16Q2WEN9 425 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 FAM166AQ6J272 317 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 TUBA1AQ71U36 451 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 TMEM123Q8N131 208 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 C10orf53Q8N6V4 93 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF525Q8N782 197 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 SLC26A7Q8TE54 656 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 RASSF5Q8WWW0 418 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 LRR1Q96L50 414 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 ARHGDIGQ99819 225 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 KAT8Q9H7Z6 458 aaKnown RBP9.65□□□□□ -0.86
CCDC47-206ENST00000584112 CA10Q9NS85 328 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 USP22Q9UPT9 525 aa9.65□□□□□ -0.86
CCDC47-206ENST00000584112 NOTCH3Q9UM47 2321 aa9.65□□□□□ -0.87
CCDC47-206ENST00000584112 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF726A6NNF4 738 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 MS4A18H0YCH9 400 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 M0R3G1 203 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 M0R3H8 397 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 TPST2O60704 377 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 OR6A2O95222 327 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 HPRP00739 348 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 OPN1SWP03999 348 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 H2AFXP16104 143 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-206ENST00000584112 PCGF2P35227 344 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 SERPINF1P36955 418 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 CAPZA2P47755 286 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 CYLC2Q14093 348 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-206ENST00000584112 SELPLGQ14242 412 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 DUSP7Q16829 419 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 TRMT5Q32P41 509 aaKnown RBP9.64□□□□□ -0.87
CCDC47-206ENST00000584112 MS4A18Q3C1V0 323 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 ENTPD8Q5MY95 495 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 SLC46A3Q7Z3Q1 461 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 PXKQ7Z7A4 578 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 RETREG3Q86VR2 466 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 NUP37Q8NFH4 326 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 IL17RDQ8NFM7 739 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 OR5J2Q8NH18 312 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 C10orf105Q8TEF2 133 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 HTRA1Q92743 480 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 PROX1Q92786 737 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 SH3GL1Q99961 368 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF442Q9H7R0 627 aa9.64□□□□□ -0.87
CCDC47-206ENST00000584112 MYOZ1Q9NP98 299 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-206ENST00000584112 LOC100289279A0A1B0GTE1 492 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 TRAPPC13A5PLN9 417 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 CPSF4LA6NMK7 179 aaKnown RBP9.63□□□□□ -0.87
CCDC47-206ENST00000584112 NDUFS8O00217 210 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 PLPP3O14495 311 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 ENTPD5O75356 428 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 OR4A8P0C604 315 aa9.63□□□□□ -0.87
CCDC47-206ENST00000584112 ADORA3P0DMS8 318 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms