RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DUSP7Q16829 419 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TIMM50Q3ZCQ8 353 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 AARDQ4LEZ3 155 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 KLHL26Q53HC5 615 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 FBXO48Q5FWF7 155 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ARMCX4Q5H9R4 360 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRC73Q5JTD7 316 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 SPOUT1Q5T280 376 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 LIPJQ5W064 366 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRC66Q68CR7 880 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 NEK5Q6P3R8 708 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 PSRC1Q6PGN9 363 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 MACC1Q6ZN28 852 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM182Q6ZP80 229 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 USP50Q70EL3 339 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TSEN54Q7Z6J9 526 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 KLHDC8AQ8IYD2 350 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 RDH10Q8IZV5 341 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 CYP4Z2PQ8N1L4 340 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 C10orf111Q8N326 155 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TCAIMQ8N3R3 496 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 KRTCAP2Q8N6L1 136 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM83FQ8NEG4 500 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 OR7G1Q8NGA0 311 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 OR4C15Q8NGM1 316 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 HPSE2Q8WWQ2 592 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 BCL2L2Q92843 193 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 DAZLQ92904 295 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 PYCR2Q96C36 320 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 C11orf24Q96F05 449 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 OTUB1Q96FW1 271 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 C5orf30Q96GV9 206 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 RPRD1AQ96P16 312 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRC3BQ96PB8 259 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TRNT1Q96Q11 434 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 MYADMQ96S97 322 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 MAPKAP1Q9BPZ7 522 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 COPS4Q9BT78 406 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TAPBPLQ9BX59 468 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 CLEC7AQ9BXN2 247 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 GON7Q9BXV9 100 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 RIBC2Q9H4K1 309 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 CWH43Q9H720 699 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 REEP1Q9H902 201 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 TBC1D17Q9HA65 648 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC25A19Q9HC21 320 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ZFP14Q9HCL3 533 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 DYRK4Q9NR20 520 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 POLE4Q9NR33 117 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ABCB10Q9NRK6 738 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 FARSBQ9NSD9 589 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 EXD2Q9NVH0 621 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF226Q9NYT6 803 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 FLRT3Q9NZU0 649 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ENOPH1Q9UHY7 261 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF221Q9UK13 617 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 SNX6Q9UNH7 406 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 ABCG2Q9UNQ0 655 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 CFL2Q9Y281 166 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 POFUT2Q9Y2G5 429 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 PPIL1Q9Y3C6 166 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 STRAPQ9Y3F4 350 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 SAMHD1Q9Y3Z3 626 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 U3KQV3 271 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 PTPRDP23468 1912 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 OTOFQ9HC10 1997 aa3.4□□□□□ -1.87
SMCHD1-208ENST00000583344 PCNTO95613 3336 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 AGRNO00468 2067 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 A0A0A6YYC8 382 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 A0A0D9SEW6 157 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ARRDC5A6NEK1 342 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 EFCAB10A6NFE3 127 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 C5orf52A6NGY3 159 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM25AB3EWG3 89 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM25CB3EWG5 89 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM25GB3EWG6 89 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 F5H5T6 163 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 I3L1I5 382 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CACNB4O00305 520 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CCRL2O00421 344 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GAPDHSO14556 408 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FPGTO14772 594 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ATP6V0E1O15342 81 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 IDH3BO43837 385 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 KIAA0513O60268 411 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 DUSP11O75319 330 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 TRIM3O75382 744 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GCM2O75603 506 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC25A14O95258 325 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FADS2O95864 444 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC16A8O95907 504 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PDYNP01213 254 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 YES1P07947 543 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 STSP08842 583 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PIRTP0C851 137 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MPC1LP0DKB6 136 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 C8orf89P0DMQ9 161 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms