RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 KIRREL3Q8IZU9 778 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 SIGLECL1Q8N7X8 197 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 ZNF519Q8TB69 540 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 SYNPRQ8TBG9 265 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 ST7LQ8TDW4 575 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 C11orf40Q8WZ69 217 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 DVL3Q92997 716 aaPredicted RBP7.68□□□□□ -1.18
SMG6-218ENST00000575454 SLC38A4Q969I6 547 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 LRRC58Q96CX6 371 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 ELMOD3Q96FG2 381 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 APOPT1Q96IL0 206 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 ZNF75AQ96N20 296 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 PANX1Q96RD7 426 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 GAL3ST1Q99999 423 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 PTDSS2Q9BVG9 487 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 SPATA9Q9BWV2 254 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 LRMDAQ9H2I8 198 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 C1orf198Q9H425 327 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 AKTIPQ9H8T0 292 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 MYEF2Q9P2K5 600 aaKnown RBP7.68□□□□□ -1.18
SMG6-218ENST00000575454 RPS6KB2Q9UBS0 482 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 OPN4Q9UHM6 478 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 NUP50Q9UKX7 468 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 FZR1Q9UM11 496 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 IFT52Q9Y366 437 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 WIPI2Q9Y4P8 454 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 CMYA5Q8N3K9 4069 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 TRAV36DV7A0A075B6V5 113 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 A0A1B0GUS0 222 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 SMIM23A6NLE4 172 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 E9PBE3 544 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 M0R082 166 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 TRAF3IP2O43734 574 aaPredicted RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 FOXH1O75593 365 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 SEC14L2O76054 403 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 PTHP01270 115 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 SHBGP04278 402 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 RNASE1P07998 156 aaKnown RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 FAM153BP0C7A2 387 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 MYZAPP0CAP1 466 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 B4GALT1P15291 398 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ZNF250P15622 560 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 DRD4P21917 467 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 GRPRP30550 384 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 GCH1P30793 250 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 EGR4Q05215 589 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 CHI3L2Q15782 390 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ARMCX4Q5H9R4 360 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 SPANXN4Q5MJ08 99 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 CARD17Q5XLA6 110 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 C6orf89Q6UWU4 347 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ZNF836Q6ZNA1 936 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 PIWIL3Q7Z3Z3 882 aaKnown RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 VRK2Q86Y07 508 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 C17orf53Q8N3J3 647 aaPredicted RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 OR6N1Q8NGY5 312 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 OR6S1Q8NH40 331 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ZNF417Q8TAU3 575 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 C22orf15Q8WYQ4 148 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 KTI12Q96EK9 354 aaPredicted RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 ZNF587Q96SQ5 575 aaPredicted RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 EPYCQ99645 322 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 FOXB1Q99853 325 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ULBP2Q9BZM5 246 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 BCL2L14Q9BZR8 327 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 SAP30LQ9HAJ7 183 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 PLEK2Q9NYT0 353 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ARMCX1Q9P291 453 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 TESQ9UGI8 421 aaKnown RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 ZNF443Q9Y2A4 671 aaPredicted RBP7.67□□□□□ -1.18
SMG6-218ENST00000575454 GPR45Q9Y5Y3 372 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 ARFGEF3Q5TH69 2177 aa7.67□□□□□ -1.18
SMG6-218ENST00000575454 WNK1Q9H4A3 2382 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 IGLV3-9A0A075B6K5 115 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 A0A0G2JPF8 293 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 HNRNPCL2B2RXH8 293 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 HNRNPCL3B7ZW38 293 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 HNRNPCL1O60812 293 aaKnown RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 FARS2O95363 451 aaKnown RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 HNRNPCL4P0DMR1 293 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 PRG2P13727 222 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 NQO1P15559 274 aaKnown RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 MTNR1AP48039 350 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 RAB39AQ14964 217 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 TUSC1Q2TAM9 212 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 ALKBH6Q3KRA9 238 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 UNQ6126/PRO20091Q6UXV3 157 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 USP51Q70EK9 711 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 WDFY1Q8IWB7 410 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 CLIP4Q8N3C7 705 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 EIF1ADQ8N9N8 165 aaKnown RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 SCAIQ8N9R8 606 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 SLC30A7Q8NEW0 376 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 OR1J2Q8NGS2 313 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 PNPT1Q8TCS8 783 aaKnown RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 UBLCP1Q8WVY7 318 aaPredicted RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 DNAJA4Q8WW22 397 aaPredicted RBP7.66□□□□□ -1.18
SMG6-218ENST00000575454 TAAR8Q969N4 342 aa7.66□□□□□ -1.18
SMG6-218ENST00000575454 TRIM44Q96DX7 344 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms