RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 C6orf136Q5SQH8 315 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 MED27Q6P2C8 311 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 IKBIPQ70UQ0 350 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 C11orf44Q8N8P7 122 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 L3MBTL4Q8NA19 623 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 DEFB108BQ8NET1 73 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ATP6V1C2Q8NEY4 427 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 BHLHE22Q8NFJ8 381 aaPredicted RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 OR52E4Q8NGH9 312 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 EDARADDQ8WWZ3 215 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 UBE2E3Q969T4 207 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ESAMQ96AP7 390 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 APH1AQ96BI3 265 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ROPN1LQ96C74 230 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 RCN3Q96D15 328 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CLPTM1LQ96KA5 538 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 VSTM2LQ96N03 204 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 SLC38A2Q96QD8 506 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 KCNA7Q96RP8 456 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CHCHD6Q9BRQ6 235 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CENPOQ9BU64 300 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 KATNB1Q9BVA0 655 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 MRPL1Q9BYD6 325 aaKnown RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 TBL1XR1Q9BZK7 514 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 NOL11Q9H8H0 719 aaKnown RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 DDX31Q9H8H2 851 aaKnown RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 MED17Q9NVC6 651 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 AIG1Q9NVV5 245 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 FAM120CQ9NX05 1096 aaKnown RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 PLA2G2EQ9NZK7 142 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 NOP53Q9NZM5 478 aaKnown RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 OPTCQ9UBM4 332 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 POMPQ9Y244 141 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 NDUFAF1Q9Y375 327 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CCL27Q9Y4X3 112 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 LRRC42Q9Y546 428 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 C1orf226A1L170 272 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 F5H0A9 414 aaPredicted RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 AIM2O14862 343 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 ANKRD28O15084 1053 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 EFNA2O43921 213 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 UGDHO60701 494 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 CYTIPO60759 359 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 NPPAP01160 153 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 IGHV2-5P01817 119 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 LINC00032P0C843 101 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 NHLRC4P0CG21 123 aaPredicted RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 IGHV4-38-2P0DP08 117 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 IGLL1P15814 213 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 EPORP19235 508 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 SERPINB1P30740 379 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 CALCRP30988 508 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 TIA1P31483 386 aaKnown RBP eCLIP5.86□□□□□ -1.47
CHD3-213ENST00000571249 NUDT2P50583 147 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 ZNF41P51814 821 aaPredicted RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 SUMO3P55854 103 aaPredicted RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 STX1BP61266 288 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 PSPHP78330 225 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 NAAAQ02083 359 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 HGFACQ04756 655 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 SLC34A1Q06495 639 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 TRAP1Q12931 704 aaKnown RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 CEACAM7Q14002 265 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 TRIM25Q14258 630 aaKnown RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 PLPPR5Q32ZL2 321 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 AGKQ53H12 422 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 NKAPLQ5M9Q1 402 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 C1orf146Q5VVC0 180 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 CDPF1Q6NVV7 123 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 APOOLQ6UXV4 268 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 LAS2Q8IYD9 372 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 LYG1Q8N1E2 194 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 C17orf78Q8N4C9 275 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 LSMEM1Q8N8F7 131 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 OR7G3Q8NG95 312 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 OR4F15Q8NGB8 312 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 OR4F6Q8NGB9 312 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 OR2T11Q8NH01 316 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 HUS1BQ8NHY5 278 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 METTL6Q8TCB7 284 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 TUBGCP3Q96CW5 907 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 DUS3LQ96G46 650 aaKnown RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 MAP6Q96JE9 813 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 MRGPRX4Q96LA9 322 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 PPP1R36Q96LQ0 422 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 HOPXQ9BPY8 73 aaPredicted RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 KLHDC3Q9BQ90 382 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 ZNF416Q9BWM5 594 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 ZNF442Q9H7R0 627 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 COQ10BQ9H8M1 238 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 MMP26Q9NRE1 261 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 SIRT3Q9NTG7 399 aaPredicted RBP5.86□□□□□ -1.47
CHD3-213ENST00000571249 TMEM181Q9P2C4 612 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 ABCD2Q9UBJ2 740 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 CD300AQ9UGN4 299 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 FIS1Q9Y3D6 152 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 TIMM22Q9Y584 194 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 AUP1Q9Y679 476 aa5.86□□□□□ -1.47
CHD3-213ENST00000571249 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms