RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SMYD1Q8NB12 490 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 ANKK1Q8NFD2 765 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 FGFBP3Q8TAT2 258 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 DNAJA4Q8WW22 397 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 MRPL24Q96A35 216 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC47A1Q96FL8 570 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 EBF4Q9BQW3 602 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 ASPNQ9BXN1 380 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 ULBP2Q9BZM5 246 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR51B6Q9H340 312 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 RAD21L1Q9H4I0 556 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 IKZF5Q9H5V7 419 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 C12orf10Q9HB07 376 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEM27Q9HBJ8 222 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 MOV10Q9HCE1 1003 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 TREM2Q9NZC2 230 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 SELENONQ9NZV5 590 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 CCDC167Q9P0B6 97 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 VAPAQ9P0L0 249 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 DUSP13Q9UII6 198 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC13A4Q9UKG4 626 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 PRDM4Q9UKN5 801 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 RAB21Q9UL25 225 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 A0A0B4J2E0 115 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 LOC102725191A0A1B0GVB3 256 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 A0A1B0GX12 115 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 FAM157AC9JC47 383 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 M0R3H8 397 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 PLPP3O14495 311 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 POLR3GO15318 223 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 TCF21O43680 179 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 SYNGR3O43761 229 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CDC14BO60729 498 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 FZD7O75084 574 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 RAB36O95755 333 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 OPN1SWP03999 348 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 FAM157BP0CG42 384 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CCL2P13500 99 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF35P13682 527 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF14P17017 642 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CSNK1A1P48729 337 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 IDH3AP50213 366 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CDH12P55289 794 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 BIDP55957 195 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 RAB1AP62820 205 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 GALK2Q01415 458 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 PUDPQ08623 228 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 ELFN2Q5R3F8 820 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 BLOC1S3Q6QNY0 202 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 NHLRC1Q6VVB1 395 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 WDR88Q6ZMY6 472 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CROCCP2Q86T23 111 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 KRT73Q86Y46 540 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 SKA3Q8IX90 412 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CCDC36Q8IYA8 594 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 PIP4P2Q8N4L2 257 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 RFLNBQ8N5W9 214 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 IL17RDQ8NFM7 739 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CLDND2Q8NHS1 167 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 HPS1Q92902 700 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 YIPF5Q969M3 257 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC35B4Q969S0 331 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 SPDL1Q96EA4 605 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC41A3Q96GZ6 507 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF75AQ96N20 296 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 EPYCQ99645 322 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 FOXB1Q99853 325 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 METTL17Q9H7H0 456 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLCO1B3Q9NPD5 702 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 B3GAT2Q9NPZ5 323 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 TCF7L2Q9NQB0 619 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF224Q9NZL3 707 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 TESQ9UGI8 421 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.22
CTDNEP1-203ENST00000570385 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 A0A1W2PPW3 197 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 CPSF4LA6NMK7 179 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 KPNA4O00629 521 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 PPIHO43447 177 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 NCR1O76036 304 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 VENTXO95231 258 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 CH25HO95992 272 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 CLPTM1O96005 669 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 ADORA3P0DMS8 318 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 SLC6A2P23975 617 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 GLRXP35754 106 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 MAGEB1P43366 347 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 GPR6P46095 362 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 ERVS71-1P61550 626 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 MELKQ14680 651 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 AGKQ53H12 422 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 LRIF1Q5T3J3 769 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 FAM91A1Q658Y4 838 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 C5orf46Q6UWT4 87 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 RBM45Q8IUH3 476 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 ARMC8Q8IUR7 673 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 ZNF584Q8IVC4 421 aa7.39□□□□□ -1.23
CTDNEP1-203ENST00000570385 PAQR4Q8N4S7 273 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms