RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
GTF3C1-211ENST00000569653 RNF212BA8MTL3 300 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 ZNF99A8MXY4 864 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 B9A039 149 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 FBP2O00757 339 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 PLPP3O14495 311 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 SERPINB7O75635 380 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 NPPAP01160 153 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 FAM157CP0CG43 387 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 CD247P20963 164 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 IL2RGP31785 369 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 PDLIM4P50479 330 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 GZMMP51124 257 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 NPRL3Q12980 569 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 CYLC2Q14093 348 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 REP15Q6BDI9 236 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 C5orf46Q6UWT4 87 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 SLC46A3Q7Z3Q1 461 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 NET1Q7Z628 596 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 ARMC8Q8IUR7 673 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 SLC30A8Q8IWU4 369 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 UEVLDQ8IX04 471 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 PCYOX1LQ8NBM8 494 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 PIK3C3Q8NEB9 887 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 BHLHE22Q8NFJ8 381 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 OR6S1Q8NH40 331 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 TAMM41Q96BW9 452 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 SLC47A1Q96FL8 570 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 SH3GL1Q99961 368 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 ELAC2Q9BQ52 826 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 BPESC1Q9GZL8 116 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 NSRP1Q9H0G5 558 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 MRPL39Q9NYK5 338 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 SLC13A4Q9UKG4 626 aa11.96□□□□□ -0.49
GTF3C1-211ENST00000569653 hCG_2039718K7EN88 272 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 MRASO14807 208 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 SNX3O60493 162 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 B4GALT1P15291 398 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 NQO1P15559 274 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 PPOXP50336 477 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 NCALDP61601 193 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 IL1RL1Q01638 556 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 PUDPQ08623 228 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 CAMK2DQ13557 499 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 MFSD13AQ14CX5 517 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 CARTPTQ16568 116 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 SPATA21Q7Z572 469 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 SNX32Q86XE0 403 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 LRRC17Q8N6Y2 441 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 SCAIQ8N9R8 606 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 OR4F15Q8NGB8 312 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 MCHR1Q99705 422 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 KCNS3Q9BQ31 491 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 TMEM43Q9BTV4 400 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 KAT8Q9H7Z6 458 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 TMEM160Q9NX00 188 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 FKBP7Q9Y680 259 aa11.95□□□□□ -0.5
GTF3C1-211ENST00000569653 LRP5LA4QPB2 252 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 CPSF4LA6NMK7 179 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 M0QX08 132 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 FXYD1O00168 92 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 CCDC22O60826 627 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 SERPINI2O75830 405 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 PATE4P0C8F1 98 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 BMP4P12644 408 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF35P13682 527 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 NPR2P20594 1047 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 ARR3P36575 388 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 PIGFQ07326 219 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 PMS2P3Q13401 168 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 SNTB2Q13425 540 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 KRTAP24-1Q3LI83 254 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 INTS11Q5TA45 600 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 KRT80Q6KB66 452 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 PODNL1Q6PEZ8 512 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 PIGWQ7Z7B1 504 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF584Q8IVC4 421 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 OR8J3Q8NGG0 315 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 LRRC58Q96CX6 371 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 MRPL37Q9BZE1 423 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 FAM107BQ9H098 131 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 CHODLQ9H9P2 273 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 TMEM27Q9HBJ8 222 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 GID8Q9NWU2 228 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 TAS2R5Q9NYW4 299 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 MYEF2Q9P2K5 600 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 CDC42EP3Q9UKI2 254 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 USP22Q9UPT9 525 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms