RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 POM121CA8CG34 1229 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 KRT75O95678 551 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 BCHEP06276 602 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 GRPRP30550 384 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 CDKN2CP42773 168 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 CRYBB2P43320 205 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 AQP5P55064 265 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 KLF3P57682 345 aaPredicted RBP10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 IL13RA1P78552 427 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 LRRC74AQ0VAA2 488 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 CAMK2DQ13557 499 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 C6orf89Q6UWU4 347 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 DOK3Q7L591 496 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 RETREG3Q86VR2 466 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 SIGLECL1Q8N7X8 197 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 ADPRHL1Q8NDY3 354 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 TCP10LQ8TDR4 215 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC38A4Q969I6 547 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 LRRC58Q96CX6 371 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 FOXB1Q99853 325 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 RHOXF2Q9BQY4 288 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 SPATA9Q9BWV2 254 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 ULBP2Q9BZM5 246 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 SLCO1C1Q9NYB5 712 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 NKIRAS2Q9NYR9 191 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF232Q9UNY5 417 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 CHST2Q9Y4C5 530 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 IGLV3-9A0A075B6K5 115 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 SPAG7O75391 227 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 SERPINA5P05154 406 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 BPGMP07738 259 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 NQO1P15559 274 aaKnown RBP10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 RAB39AQ14964 217 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 HFEQ30201 348 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 USP51Q70EK9 711 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 NET1Q7Z628 596 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF584Q8IVC4 421 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF781Q8N8C0 355 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC38A5Q8WUX1 472 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 RAB1CQ92928 201 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 TAAR8Q969N4 342 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC35B4Q969S0 331 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 TEX37Q96LM6 180 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 DUX5Q96PT3 197 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 OR52E6Q96RD3 313 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 GAL3ST1Q99999 423 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 EMC6Q9BV81 110 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 C12orf10Q9HB07 376 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 DECR2Q9NUI1 292 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 RPS6KB2Q9UBS0 482 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 IFT52Q9Y366 437 aa10.05□□□□□ -0.8
GTF3C1-209ENST00000568569 TRAV36DV7A0A075B6V5 113 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 TLDC2A0PJX2 215 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 TPD52L2O43399 206 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 ENTPD5O75356 428 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 CLPTM1O96005 669 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 MT-ND5P03915 603 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 MYZAPP0CAP1 466 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 FAM157BP0CG42 384 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 HLA-DOBP13765 273 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 ETFAP13804 333 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF250P15622 560 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 LBPP18428 481 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 DSTNP60981 165 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 HOXC5Q00444 222 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 RBBP4Q09028 425 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 OCLNQ16625 522 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 RPS26P11Q5JNZ5 115 aaPredicted RBP10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 EIF1ADQ8N9N8 165 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 SYT14Q8NB59 555 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC30A7Q8NEW0 376 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 OR6N1Q8NGY5 312 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 SYNPRQ8TBG9 265 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 POP5Q969H6 163 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 TSPAN32Q96QS1 320 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 GPA33Q99795 319 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 C1QTNF5Q9BXJ0 243 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 SLITRK2Q9H156 845 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 SAP30LQ9HAJ7 183 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 MED29Q9NX70 200 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
GTF3C1-209ENST00000568569 IGKV1D-42A0A075B6H8 117 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 A0A087WUJ7 227 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 A0A0G2JPF8 293 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 TMEM247A6NEH6 219 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF726A6NNF4 738 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 HNRNPCL2B2RXH8 293 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 HNRNPCL3B7ZW38 293 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 RFXANKO14593 260 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ITM2AO43736 263 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 HNRNPCL1O60812 293 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 HPRP00739 348 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms