RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PUDPQ08623 228 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 RBBP4Q09028 425 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 SNTB2Q13425 540 aaKnown RBP12.94□□□□□ -0.34
RNF40-209ENST00000566703 RIN1Q13671 783 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 CR1LQ2VPA4 569 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 TRMT5Q32P41 509 aaKnown RBP12.94□□□□□ -0.34
RNF40-209ENST00000566703 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
RNF40-209ENST00000566703 AGBL2Q5U5Z8 902 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 ZNF613Q6PF04 617 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 LINC00114Q6XXX2 140 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 ZNF813Q6ZN06 617 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 ARMC8Q8IUR7 673 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 RNF217Q8TC41 542 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 MRPL24Q96A35 216 aaKnown RBP12.94□□□□□ -0.34
RNF40-209ENST00000566703 TXNDC15Q96J42 360 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 FBN3Q75N90 2809 aa12.94□□□□□ -0.34
RNF40-209ENST00000566703 SH3PXD2BA1X283 911 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 LRP5LA4QPB2 252 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 SYNGR3O43761 229 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 ENTPD5O75356 428 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 ADRA2AP08913 450 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 CD79AP11912 226 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 ZNF14P17017 642 aaPredicted RBP12.93□□□□□ -0.34
RNF40-209ENST00000566703 CDH12P55289 794 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 RUNDC3AQ59EK9 446 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 REP15Q6BDI9 236 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 PIWIL3Q7Z3Z3 882 aaKnown RBP12.93□□□□□ -0.34
RNF40-209ENST00000566703 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
RNF40-209ENST00000566703 OR6N1Q8NGY5 312 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 OR5J2Q8NH18 312 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 MOGAT1Q96PD6 335 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 MCHR1Q99705 422 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 FOXB1Q99853 325 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 C19orf24Q9BVV8 132 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 ULBP2Q9BZM5 246 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 RABEP2Q9H5N1 569 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 MED29Q9NX70 200 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 REV1Q9UBZ9 1251 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.93□□□□□ -0.34
RNF40-209ENST00000566703 ANGPT4Q9Y264 503 aa12.93□□□□□ -0.34
RNF40-209ENST00000566703 SEC14L2O76054 403 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 UBL3O95164 117 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 IFNGR1P15260 489 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 PCMT1P22061 227 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 AHCYP23526 432 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
RNF40-209ENST00000566703 PCBP3P57721 371 aaKnown RBP12.92□□□□□ -0.34
RNF40-209ENST00000566703 RPS23P62266 143 aaKnown RBP12.92□□□□□ -0.34
RNF40-209ENST00000566703 RAB1AP62820 205 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 PIGFQ07326 219 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 ZP4Q12836 540 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 CAMK2DQ13557 499 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 AGKQ53H12 422 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 MALRD1Q5VYJ5 2156 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 KRT80Q6KB66 452 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 DLEU7Q6UYE1 221 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 C10orf53Q8N6V4 93 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 C11orf65Q8NCR3 313 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 OR6X1Q8NH79 312 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 STON2Q8WXE9 905 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 EBF4Q9BQW3 602 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 SOX7Q9BT81 388 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 IKZF5Q9H5V7 419 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 SLCO1B3Q9NPD5 702 aa12.92□□□□□ -0.34
RNF40-209ENST00000566703 TMEFF2Q9UIK5 374 aaPredicted RBP12.92□□□□□ -0.34
RNF40-209ENST00000566703 M0QX08 132 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 M0R233 179 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 CHP2O43745 196 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 OR6A2O95222 327 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 RAB36O95755 333 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 AQP1P29972 269 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 CSNK1A1P48729 337 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 DVL1P1P54792 670 aaPredicted RBP12.91□□□□□ -0.34
RNF40-209ENST00000566703 AQP5P55064 265 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 CDH15P55291 814 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 FXNQ16595 210 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 SLC30A8Q8IWU4 369 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 TSPEARQ8WU66 669 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 TMEM54Q969K7 222 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 ARHGDIGQ99819 225 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 WFDC6Q9BQY6 131 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 CPPED1Q9BRF8 314 aaPredicted RBP12.91□□□□□ -0.34
RNF40-209ENST00000566703 MRPL37Q9BZE1 423 aaKnown RBP12.91□□□□□ -0.34
RNF40-209ENST00000566703 GLTPQ9NZD2 209 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
RNF40-209ENST00000566703 LEF1Q9UJU2 399 aaPredicted RBP12.91□□□□□ -0.34
RNF40-209ENST00000566703 LRRN3E7EW58 273 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 MGRN1O60291 552 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 SERPINA5P05154 406 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 ADORA3P0DMS8 318 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 B4GALT1P15291 398 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 LSP1P33241 339 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 GIPRP48546 466 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms