RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SH3GL1Q99961 368 aa13□□□□□ -0.33
SPG7-210ENST00000564409 BEX2Q9BXY8 128 aa13□□□□□ -0.33
SPG7-210ENST00000564409 PCDHAC1Q9H158 963 aa13□□□□□ -0.33
SPG7-210ENST00000564409 TRAPPC13A5PLN9 417 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 hCG_2039718K7EN88 272 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
SPG7-210ENST00000564409 NPPAP01160 153 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 ADORA3P0DMS8 318 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 IGHV4-31P0DP07 118 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 HLA-DOBP13765 273 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 NR4A1P22736 598 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 AHCYP23526 432 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 GIFP27352 417 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 PCGF2P35227 344 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 THBS4P35443 961 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 NPRL3Q12980 569 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 CYLC2Q14093 348 aaPredicted RBP12.99□□□□□ -0.33
SPG7-210ENST00000564409 DAG1Q14118 895 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 ENTPD8Q5MY95 495 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 TTC33Q6PID6 262 aaPredicted RBP12.99□□□□□ -0.33
SPG7-210ENST00000564409 VHLLQ6RSH7 139 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 ZNF813Q6ZN06 617 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 PIWIL3Q7Z3Z3 882 aaKnown RBP12.99□□□□□ -0.33
SPG7-210ENST00000564409 OR6T1Q8NGN1 323 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 OR6X1Q8NH79 312 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 SLC26A7Q8TE54 656 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 DOK1Q99704 481 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 EMC6Q9BV81 110 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 ULBP2Q9BZM5 246 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 NANSQ9NR45 359 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 CMAHPQ9Y471 501 aa12.99□□□□□ -0.33
SPG7-210ENST00000564409 M0R3H8 397 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 LMX1BO60663 402 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 LY6HO94772 140 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 UBL3O95164 117 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 HIST1H2ABP04908 130 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 CELA3BP08861 270 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 MTPNP58546 118 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 RPS23P62266 143 aaKnown RBP12.98□□□□□ -0.33
SPG7-210ENST00000564409 CAMK2DQ13557 499 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 ZNF74Q16587 644 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 TRMT5Q32P41 509 aaKnown RBP12.98□□□□□ -0.33
SPG7-210ENST00000564409 PHYHD1Q5SRE7 291 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 CARD17Q5XLA6 110 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 FAM166AQ6J272 317 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 CCDC80Q76M96 950 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 HIST3H2AQ7L7L0 130 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 DPPA2Q7Z7J5 298 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 RETREG3Q86VR2 466 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 ANKS4BQ8N8V4 417 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 ADAMTS16Q8TE57 1224 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 TMEM158Q8WZ71 300 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 HIST1H2ACQ93077 130 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 FOXN4Q96NZ1 517 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 WFDC6Q9BQY6 131 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 ZNF426Q9BUY5 554 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 POLR2J2Q9GZM3 115 aaKnown RBP12.98□□□□□ -0.33
SPG7-210ENST00000564409 SHARPINQ9H0F6 387 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 POLR2J3Q9H1A7 115 aaKnown RBP12.98□□□□□ -0.33
SPG7-210ENST00000564409 SEC61A2Q9H9S3 476 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 MED29Q9NX70 200 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 ZNF229Q9UJW7 825 aa12.98□□□□□ -0.33
SPG7-210ENST00000564409 ZNF503-AS2A6NEH8 195 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 MGRN1O60291 552 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 RAB36O95755 333 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 HLA-HP01893 362 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 CD79AP11912 226 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 APEHP13798 732 aaKnown RBP12.97□□□□□ -0.33
SPG7-210ENST00000564409 ZNF14P17017 642 aaPredicted RBP12.97□□□□□ -0.33
SPG7-210ENST00000564409 ZNF23P17027 643 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 CD247P20963 164 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 SNTB2Q13425 540 aaKnown RBP12.97□□□□□ -0.33
SPG7-210ENST00000564409 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 VMACQ2NL98 169 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 COQ5Q5HYK3 327 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 REP15Q6BDI9 236 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 SLC35D2Q76EJ3 337 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 HDDC2Q7Z4H3 204 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 SPATA21Q7Z572 469 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 MYPOPQ86VE0 399 aaPredicted RBP12.97□□□□□ -0.33
SPG7-210ENST00000564409 ZNF786Q8N393 782 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 HPS1Q92902 700 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 TMEM54Q969K7 222 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 SLC25A44Q96H78 314 aaPredicted RBP12.97□□□□□ -0.33
SPG7-210ENST00000564409 TXNDC15Q96J42 360 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 ZNF75AQ96N20 296 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 FOXB1Q99853 325 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 DYNLRB1Q9NP97 96 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 GLTPQ9NZD2 209 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 KCNS2Q9ULS6 477 aa12.97□□□□□ -0.33
SPG7-210ENST00000564409 A0A0G2JND7 137 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 TMEM129A0AVI4 362 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 CPSF4LA6NMK7 179 aaKnown RBP12.96□□□□□ -0.33
SPG7-210ENST00000564409 CENPBD1B2RD01 187 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 SYNGR3O43761 229 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms