RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 NINJ2Q9NZG7 142 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 NPTNQ9Y639 398 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 RYR2Q92736 4967 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC22A23A1A5C7 686 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 A8MVM7 634 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 G3V2L1 256 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 H3BQF6 201 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 M0R3G1 203 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 SCN2BO60939 215 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ERLIN1O75477 346 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 IGHV1-46P01743 117 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 IGHV3-13P01766 116 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 SERPINA5P05154 406 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ADH4P08319 380 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 CSF1P09603 554 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 TFPTP0C1Z6 253 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 PATE4P0C8F1 98 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 FAM157BP0CG42 384 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 OR8G3PP0DMU2 310 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 OR12D1P0DN82 309 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF43P17038 809 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 RPS4Y1P22090 263 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 HPCAL1P37235 193 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ACAA2P42765 397 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 MMP15P51511 669 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 AQP5P55064 265 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 EGR4Q05215 589 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 C2orf54Q08AI8 447 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 PTGR1Q14914 329 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 MFSD13AQ14CX5 517 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 LSM12Q3MHD2 195 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 C1orf140Q5VVS0 124 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 CCBE1Q6UXH8 406 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 NHLRC1Q6VVB1 395 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 BRD3OSQ6XYD6 125 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF813Q6ZN06 617 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF620Q6ZNG0 422 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 C16orf62Q7Z3J2 963 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 RNF130Q86XS8 419 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 RIMKLAQ8IXN7 391 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 DDIASQ8IXT1 998 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 C20orf196Q8IYI0 205 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 PIK3C3Q8NEB9 887 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 OR10S1Q8NGN2 331 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 MFSD8Q8NHS3 518 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF519Q8TB69 540 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 SNX33Q8WV41 574 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 DIRC2Q96SL1 478 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 PRPF18Q99633 342 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 TAPBPLQ9BX59 468 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC38A1Q9H2H9 487 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 NOX4Q9NPH5 578 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 TCF7L2Q9NQB0 619 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ZDHHC18Q9NUE0 388 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 DECR2Q9NUI1 292 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 EXD2Q9NVH0 621 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 SLCO1C1Q9NYB5 712 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 GPR160Q9UJ42 338 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF180Q9UJW8 692 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 EMCNQ9ULC0 261 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 TMED5Q9Y3A6 229 aa6.47□□□□□ -1.37
HERPUD1-206ENST00000563343 TENM2Q9NT68 2774 aa6.46□□□□□ -1.37
HERPUD1-206ENST00000563343 RNF103-CHMP3A0A140T963 221 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 LOC102725191A0A1B0GVB3 256 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 CFAP73A6NFT4 308 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 ZSCAN5BA6NJL1 495 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 TPD52L2O43399 206 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 GPR137BO60478 399 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 MFN2O95140 757 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 UBL3O95164 117 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 RAB36O95755 333 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 C1QCP02747 245 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 MT-ND5P03915 603 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 NEFHP12036 1026 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 CCL2P13500 99 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 B4GALT1P15291 398 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 CXCR1P25024 350 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 GCAP28676 217 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 SOAT1P35610 550 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 RPL3P39023 403 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF81P51508 661 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 COL10A1Q03692 680 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC3A1Q07837 685 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 CHI3L2Q15782 390 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 GSTA3Q16772 222 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 TMEM155Q4W5P6 130 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 OXLD1Q5BKU9 147 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF774Q6NX45 483 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 TIFABQ6ZNK6 161 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 Q6ZSV7 163 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 LCA5Q86VQ0 697 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 LRRC28Q86X40 367 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 SKA3Q8IX90 412 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 CLECL1Q8IZS7 167 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 KRTCAP2Q8N6L1 136 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms