RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 GRPRP30550 384 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 PGDP52209 483 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 BAMBIQ13145 260 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 SKP2Q13309 424 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 RBMS2Q15434 407 aaKnown RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 FAM109BQ6ICB4 259 aaPredicted RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 FDX2Q6P4F2 183 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 ADGRG3Q86Y34 549 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 SLC22A18ASQ8N1D0 253 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 OR2G2Q8NGZ5 317 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 CEP76Q8TAP6 659 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 GCDHQ92947 438 aaPredicted RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 TCTN2Q96GX1 697 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 SEC22CQ9BRL7 303 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 TCEAL2Q9H3H9 227 aaPredicted RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 FKRPQ9H9S5 495 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 MED9Q9NWA0 146 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 MTFP1Q9UDX5 166 aa11.9□□□□□ -0.51
USB1-207ENST00000563149 MRTO4Q9UKD2 239 aaKnown RBP11.9□□□□□ -0.51
USB1-207ENST00000563149 UBE2QL1A1L167 161 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 HMSDA8MTL9 139 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 FAM171A2A8MVW0 826 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 LINC01565O15544 149 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ZNF264O43296 627 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 RGS11O94810 467 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 CLPSP04118 112 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 HIST1H2ABP04908 130 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 CTSBP07858 339 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ALOX5APP20292 161 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 CSRP1P21291 193 aaKnown RBP11.89□□□□□ -0.51
USB1-207ENST00000563149 DCTDP32321 178 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 MAGEB1P43366 347 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 PPICP45877 212 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 SLC6A8P48029 635 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 CENPAP49450 140 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 CCR5P51681 352 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 DLX5P56178 289 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 BTG2P78543 158 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 EEF1A1P5Q5VTE0 462 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ANKRD16Q6P6B7 361 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 FAM198BQ6UWH4 519 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 C3P1Q6ZMU1 363 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 HIST3H2AQ7L7L0 130 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 TMPRSS12Q86WS5 348 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ZNF676Q8N7Q3 588 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ZSCAN1Q8NBB4 408 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 PHOSPHO1Q8TCT1 267 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ZDHHC1Q8WTX9 485 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ASB13Q8WXK3 278 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 HIST1H2ACQ93077 130 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ZNF285Q96NJ3 590 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 LPAR4Q99677 370 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 NARFLQ9H6Q4 476 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ZNF69Q9UC07 566 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 IKZF2Q9UKS7 526 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 KLHDC2Q9Y2U9 406 aa11.89□□□□□ -0.51
USB1-207ENST00000563149 ATG2BQ96BY7 2078 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 A0A1W2PPL8 197 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 TOXO94900 526 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 CFDP00746 253 aaPredicted RBP11.88□□□□□ -0.51
USB1-207ENST00000563149 ALDOBP05062 364 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 NFYAP23511 347 aaPredicted RBP11.88□□□□□ -0.51
USB1-207ENST00000563149 ITPKBP27987 946 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 SOX2P48431 317 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 BLKP51451 505 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 EGR4Q05215 589 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 HTR4Q13639 388 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 GRM7Q14831 915 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 TOMM20Q15388 145 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 NNATQ16517 81 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 MESTQ5EB52 335 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 NHLRC3Q5JS37 347 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 WDR45BQ5MNZ6 344 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 TMEM92Q6UXU6 159 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 MED25Q71SY5 747 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 SLC36A1Q7Z2H8 476 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 C7orf61Q8IZ16 206 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 SIX5Q8N196 739 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 PIGKQ92643 395 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 MOGAT1Q96PD6 335 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 TSSK2Q96PF2 358 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 INTS14Q96SY0 518 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 LAT2Q9GZY6 243 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 ADAM19Q9H013 955 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 YBX2Q9Y2T7 364 aaKnown RBP11.88□□□□□ -0.51
USB1-207ENST00000563149 PCDHGA5Q9Y5G8 931 aa11.88□□□□□ -0.51
USB1-207ENST00000563149 LOC105371267A0A1B0GV96 52 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 MCRIP1C9JLW8 97 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 H0YIG0 161 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 MEN1O00255 615 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CDC123O75794 336 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 ENPP1P22413 925 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms