RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ARPC1AQ92747 370 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 PHYHIPLQ96FC7 376 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 ZFP14Q9HCL3 533 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 ADGRL3Q9HAR2 1447 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 FYCO1Q9BQS8 1478 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 DLC1Q96QB1 1528 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 CCDC18Q5T9S5 1454 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ADAMTS13Q76LX8 1427 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 A0A0U1RQS6 177 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 FAM47DPA6NHR8 397 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 USP27XA6NNY8 438 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 H0Y8G0 127 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 OR7A10O76100 309 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 C1orf105O95561 183 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 GABRR1P24046 479 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 COX7A1P24310 79 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 BTCP35070 178 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 KPNA2P52292 529 aaKnown RBP4.33□□□□□ -1.72
SMG1-204ENST00000561940 TLE4Q04727 773 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ZNF77Q15935 545 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 IL17AQ16552 155 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 PAGE3Q5JUK9 113 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 MARCH8Q5T0T0 291 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 RSBN1Q5VWQ0 802 aaPredicted RBP4.33□□□□□ -1.72
SMG1-204ENST00000561940 TMIGD1Q6UXZ0 262 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ZNF546Q86UE3 836 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 CDR2LQ86X02 465 aaPredicted RBP4.33□□□□□ -1.72
SMG1-204ENST00000561940 PIANPQ8IYJ0 282 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 C20orf203Q8NBC4 194 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 FANK1Q8TC84 345 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 TMEM101Q96IK0 257 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ZNF414Q96IQ9 312 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 NMRK1Q9NWW6 199 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 DCAF16Q9NXF7 216 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 GIN1Q9NXP7 522 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ZNF256Q9Y2P7 627 aaPredicted RBP4.33□□□□□ -1.72
SMG1-204ENST00000561940 PEX16Q9Y5Y5 336 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 CDH10Q9Y6N8 788 aa4.33□□□□□ -1.72
SMG1-204ENST00000561940 ABCC5O15440 1437 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ZFYVE9O95405 1425 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 RIMS2Q9UQ26 1411 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 PPIAL4EA0A075B759 164 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ZNF716A6NP11 495 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ABCD4O14678 606 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 NPIPB7O75200 414 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 UPK3AO75631 287 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ACTL6AO96019 429 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 CT62P0C5K7 136 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ZNF735P0CB33 412 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 UBTFL1P0CB47 393 aaPredicted RBP4.32□□□□□ -1.72
SMG1-204ENST00000561940 PPIAL4FP0DN26 164 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 GYG1P46976 350 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 PRPS1P60891 318 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 LYZP61626 148 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ACVR1Q04771 509 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ARFRP1Q13795 201 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 NSDHLQ15738 373 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 DGUOKQ16854 277 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ZNF620Q6ZNG0 422 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 RALGPS2Q86X27 583 aaPredicted RBP4.32□□□□□ -1.72
SMG1-204ENST00000561940 PRR22Q8IZ63 422 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 CCDC71LQ8N9Z2 235 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 TPD52L3Q96J77 140 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ZIM3Q96PE6 472 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 MS4A4EQ96PG1 132 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 FAIM2Q9BWQ8 316 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 LY9Q9HBG7 655 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 NT5MQ9NPB1 228 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ABCB10Q9NRK6 738 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 QPCTLQ9NXS2 382 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 CELA1Q9UNI1 258 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 CAMTA1Q9Y6Y1 1673 aa4.32□□□□□ -1.72
SMG1-204ENST00000561940 ADGRB2O60241 1585 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 NOS1P29475 1434 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 CHD2O14647 1828 aaKnown RBP4.31□□□□□ -1.72
SMG1-204ENST00000561940 A8MUA0 341 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 AGPAT2O15120 278 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 TRAF3IP2O43734 574 aaPredicted RBP4.31□□□□□ -1.72
SMG1-204ENST00000561940 TMEM50AO95807 157 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 CST1P01037 141 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 CASP14P31944 242 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 SUCLG1P53597 346 aaKnown RBP4.31□□□□□ -1.72
SMG1-204ENST00000561940 PLP1P60201 277 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 PDIA2Q13087 525 aaKnown RBP4.31□□□□□ -1.72
SMG1-204ENST00000561940 ATP6AP1Q15904 470 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 OTPQ5XKR4 325 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 NANOGNBQ7Z5D8 188 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 MFSD6LQ8IWD5 586 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 OR56B2PQ8NGI1 322 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 NIPAL2Q9H841 368 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 SLC25A22Q9H936 323 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 TM9SF3Q9HD45 589 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 KLHL28Q9NXS3 571 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 KCNIP1Q9NZI2 227 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 MTRF1LQ9UGC7 380 aaKnown RBP4.31□□□□□ -1.72
SMG1-204ENST00000561940 ADGRB3O60242 1522 aa4.31□□□□□ -1.72
SMG1-204ENST00000561940 ADCY9O60503 1353 aa4.3□□□□□ -1.72
SMG1-204ENST00000561940 A0A1W2PNU3 283 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms