RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GPR1P46091 355 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CAPZBP47756 277 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 UQCRFS1P47985 274 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 KRT6CP48668 564 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 NAAAQ02083 359 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 EXOSC2Q13868 293 aaKnown RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 ABRAXAS2Q15018 415 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 MICAQ29983 383 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZNF630Q2M218 657 aaPredicted RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 SNAI3Q3KNW1 292 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CCDC14Q49A88 953 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 NADK2Q4G0N4 442 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CYBRD1Q53TN4 286 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZNF311Q5JNZ3 666 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 LINC00242Q5T6M2 205 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ARMC12Q5T9G4 340 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 RIPPLY2Q5TAB7 128 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 MEDAGQ5VYS4 303 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZNF343Q6P1L6 599 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZCCHC12Q6PEW1 402 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 XKRXQ6PP77 449 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 IGFL2Q6UWQ7 119 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CENPUQ71F23 418 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 PHF13Q86YI8 300 aaPredicted RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 CENPLQ8N0S6 344 aaPredicted RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 OR6K2Q8NGY2 324 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CCL4L1Q8NHW4 92 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 BRSK1Q8TDC3 778 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 SLC37A2Q8TED4 501 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZBED6CLQ96FA7 236 aaPredicted RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZNF514Q96K75 400 aaPredicted RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 C9orf85Q96MD7 179 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 VSTM2LQ96N03 204 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 TIMM29Q9BSF4 260 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CNPY3Q9BT09 278 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 TBCDQ9BTW9 1192 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ZNF416Q9BWM5 594 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 FANCEQ9HB96 536 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ADGRL4Q9HBW9 690 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 SLC40A1Q9NP59 571 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 FARSBQ9NSD9 589 aaKnown RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 CUTCQ9NTM9 273 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 COX16Q9P0S2 106 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 PAK5Q9P286 719 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 GALPQ9UBC7 116 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 MLXQ9UH92 298 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 RWDD2AQ9UIY3 292 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 DNAJC12Q9UKB3 198 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 TSC2P49815 1807 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 APC2O95996 2303 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 IGSF10Q6WRI0 2623 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CFAP46Q8IYW2 2715 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 A0A0U1RQS6 177 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 TLCD2A6NGC4 264 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 C9J4A7 227 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 K7EM74 188 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CASC3O15234 703 aaKnown RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 LCMT2O60294 686 aaKnown RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 DIRAS3O95661 229 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 GUCA1CO95843 209 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 IFNB1P01574 187 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 IGFBP1P08833 259 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 NCF1P14598 390 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 COX6B1P14854 86 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 PVRP15151 417 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 IDSP22304 550 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 PSMA2P25787 234 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 AK4P27144 223 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 PCK1P35558 622 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 STC1P52823 247 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CDH6P55285 790 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 TPI1P60174 286 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CYLC2Q14093 348 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 RAB35Q15286 201 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 ZKSCAN8Q15776 578 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 ZIC1Q15915 447 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 PPP1R3AQ16821 1122 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 ADPRMQ3LIE5 342 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 BOLA3Q53S33 107 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 TMEM41BQ5BJD5 291 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 NHLRC3Q5JS37 347 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 MARC1Q5VT66 337 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 SLX4IPQ5VYV7 408 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 FAM219BQ5XKK7 198 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 OLFML2AQ68BL7 652 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 LEMD1Q68G75 181 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 ZNF562Q6V9R5 426 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 GCNT2Q8N0V5 402 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 MAPK1IP1LQ8NDC0 245 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 FDCSPQ8NFU4 85 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 RFESDQ8TAC1 157 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 FAM222BQ8WU58 562 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CT55Q8WUE5 264 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 FAM172AQ8WUF8 416 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 TFB1MQ8WVM0 346 aaKnown RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 PIH1D2Q8WWB5 315 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 NELFBQ8WX92 580 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 RXFP2Q8WXD0 754 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 ATOH8Q96SQ7 321 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CTRCQ99895 268 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms