RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 M0QX08 132 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 M0R3H8 397 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 MT-ATP6P00846 226 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 APEHP13798 732 aaKnown RBP14.02□□□□□ -0.17
SNX1-213ENST00000561026 NR4A1P22736 598 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 CAMK2DQ13557 499 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 CYP51A1Q16850 503 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 GSG1Q2KHT4 349 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 IQCCQ4KMZ1 466 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 SPATA21Q7Z572 469 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 RETREG3Q86VR2 466 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 ZCCHC24Q8N2G6 241 aaKnown RBP14.02□□□□□ -0.17
SNX1-213ENST00000561026 ARIH2OSQ8N7S6 290 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 GPR32P1Q8NGA4 272 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 OR6T1Q8NGN1 323 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 OR6N1Q8NGY5 312 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 NEU4Q8WWR8 484 aaPredicted RBP14.02□□□□□ -0.17
SNX1-213ENST00000561026 MSI2Q96DH6 328 aaKnown RBP14.02□□□□□ -0.17
SNX1-213ENST00000561026 CGREF1Q99674 301 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 BPESC1Q9GZL8 116 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 ZNF385DQ9H6B1 395 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 POFUT2Q9Y2G5 429 aa14.02□□□□□ -0.17
SNX1-213ENST00000561026 LOC100289279A0A1B0GTE1 492 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 SH3PXD2BA1X283 911 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 PHF1O43189 567 aaPredicted RBP14.01□□□□□ -0.17
SNX1-213ENST00000561026 CHP2O43745 196 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 STAMBPO95630 424 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 OPN1SWP03999 348 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 ERCC1P07992 297 aaPredicted RBP14.01□□□□□ -0.17
SNX1-213ENST00000561026 CD79AP11912 226 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 DAOP14920 347 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 ZNF23P17027 643 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 MTPNP58546 118 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 SNTB2Q13425 540 aaKnown RBP14.01□□□□□ -0.17
SNX1-213ENST00000561026 DAG1Q14118 895 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 SELPLGQ14242 412 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 NPTX1Q15818 432 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 FAM166AQ6J272 317 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 KRT80Q6KB66 452 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 ZNF813Q6ZN06 617 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 SNX32Q86XE0 403 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 PHC2Q8IXK0 858 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 OR5J2Q8NH18 312 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 TSPEARQ8WU66 669 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 CKAP2Q8WWK9 683 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 THOC1Q96FV9 657 aaKnown RBP14.01□□□□□ -0.17
SNX1-213ENST00000561026 MS4A3Q96HJ5 214 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 ZNF75AQ96N20 296 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 REPIN1Q9BWE0 567 aaKnown RBP14.01□□□□□ -0.17
SNX1-213ENST00000561026 ULBP2Q9BZM5 246 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 KAT8Q9H7Z6 458 aaKnown RBP14.01□□□□□ -0.17
SNX1-213ENST00000561026 KCNS2Q9ULS6 477 aa14.01□□□□□ -0.17
SNX1-213ENST00000561026 ANGPT2O15123 496 aa14□□□□□ -0.17
SNX1-213ENST00000561026 SERPINI2O75830 405 aa14□□□□□ -0.17
SNX1-213ENST00000561026 IGFBP1P08833 259 aaPredicted RBP14□□□□□ -0.17
SNX1-213ENST00000561026 ADORA3P0DMS8 318 aa14□□□□□ -0.17
SNX1-213ENST00000561026 ZNF35P13682 527 aa14□□□□□ -0.17
SNX1-213ENST00000561026 B4GALT1P15291 398 aa14□□□□□ -0.17
SNX1-213ENST00000561026 ZNF14P17017 642 aaPredicted RBP14□□□□□ -0.17
SNX1-213ENST00000561026 IGFBP5P24593 272 aa14□□□□□ -0.17
SNX1-213ENST00000561026 GIFP27352 417 aa14□□□□□ -0.17
SNX1-213ENST00000561026 PIGFQ07326 219 aa14□□□□□ -0.17
SNX1-213ENST00000561026 ENTPD8Q5MY95 495 aa14□□□□□ -0.17
SNX1-213ENST00000561026 WDR88Q6ZMY6 472 aa14□□□□□ -0.17
SNX1-213ENST00000561026 MAGEB18Q96M61 343 aa14□□□□□ -0.17
SNX1-213ENST00000561026 FOXB1Q99853 325 aa14□□□□□ -0.17
SNX1-213ENST00000561026 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
SNX1-213ENST00000561026 DYNLRB1Q9NP97 96 aa14□□□□□ -0.17
SNX1-213ENST00000561026 ZNF224Q9NZL3 707 aa14□□□□□ -0.17
SNX1-213ENST00000561026 TRIM33Q9UPN9 1127 aa14□□□□□ -0.17
SNX1-213ENST00000561026 CMAHPQ9Y471 501 aa14□□□□□ -0.17
SNX1-213ENST00000561026 CPSF4LA6NMK7 179 aaKnown RBP13.99□□□□□ -0.17
SNX1-213ENST00000561026 HMGB1P1B2RPK0 211 aaPredicted RBP13.99□□□□□ -0.17
SNX1-213ENST00000561026 C11orf98E9PRG8 122 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 OR6A2O95222 327 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 LYPD3O95274 346 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 THY1P04216 161 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 IFNGR1P15260 489 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 THBS2P35442 1172 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 CSNK1A1P48729 337 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 BIDP55957 195 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 NFYCQ13952 458 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 ZNF74Q16587 644 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 PATL1Q86TB9 770 aaKnown RBP13.99□□□□□ -0.17
SNX1-213ENST00000561026 RBM45Q8IUH3 476 aaKnown RBP13.99□□□□□ -0.17
SNX1-213ENST00000561026 SLC30A8Q8IWU4 369 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 CDK20Q8IZL9 346 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 ZNF786Q8N393 782 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 OR4D11Q8NGI4 311 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 OR6X1Q8NH79 312 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 ADAMTS16Q8TE57 1224 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 CHODLQ9H9P2 273 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 TAS2R5Q9NYW4 299 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 SPEF1Q9Y4P9 236 aa13.99□□□□□ -0.17
SNX1-213ENST00000561026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.179e-7■■■■□ 23.5
SNX1-213ENST00000561026 CH25HO95992 272 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 TGFAP01135 160 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 ADRA2AP08913 450 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 CD247P20963 164 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 PCGF2P35227 344 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms