RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 LRRC74AQ0VAA2 488 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 BAMBIQ13145 260 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 ARMCX4Q5H9R4 360 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 OGFOD2Q6N063 350 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 SLC25A28Q96A46 364 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 OR2M2Q96R28 347 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 GAL3ST1Q99999 423 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 SLITRK2Q9H156 845 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 MEAF6Q9HAF1 191 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 BTNL2Q9UIR0 455 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 FTCDNL1E5RQL4 147 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 OR2T1O43869 369 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF500O60304 480 aaPredicted RBP15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 NPIPB7O75200 414 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 UBL3O95164 117 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 MT-ND5P03915 603 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 S100A3P33764 101 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 CRYBB2P43320 205 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 MPP2Q14168 576 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 HFEQ30201 348 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF836Q6ZNA1 936 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 DOK3Q7L591 496 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 VRK2Q86Y07 508 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 ST7LQ8TDW4 575 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 DVL3Q92997 716 aaPredicted RBP15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 C1QTNF5Q9BXJ0 243 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 KCNK9Q9NPC2 374 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 SLCO1C1Q9NYB5 712 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 CALML5Q9NZT1 146 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 B3GAT1Q9P2W7 334 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF232Q9UNY5 417 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 WIPI2Q9Y4P8 454 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 ARHGAP32A7KAX9 2087 aa15.2■□□□□ 0.02
TSPAN3-208ENST00000560514 B4GALT1P15291 398 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 BGNP21810 368 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 SLC18A1P54219 525 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 KLF3P57682 345 aaPredicted RBP15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 LCN2P80188 198 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 CAMK2DQ13557 499 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 RAB39AQ14964 217 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 CEP85LQ5SZL2 805 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF771Q7L3S4 317 aaPredicted RBP15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 UEVLDQ8IX04 471 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 SYNPRQ8TBG9 265 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 LRRC58Q96CX6 371 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 PPP1R36Q96LQ0 422 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 CCDC115Q96NT0 180 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 PANX1Q96RD7 426 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 NUF2Q9BZD4 464 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 RPS6KB2Q9UBS0 482 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 SEC14L4Q9UDX3 406 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 OPN4Q9UHM6 478 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 NUP50Q9UKX7 468 aa15.19■□□□□ 0.02
TSPAN3-208ENST00000560514 ISPDA4D126 451 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 CCDC154A6NI56 674 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 E9PBE3 544 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 M0R082 166 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 FSHBP01225 129 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 NQO1P15559 274 aaKnown RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ATP4BP51164 291 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 AQP5P55064 265 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 MFSD13AQ14CX5 517 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 MOGQ16653 247 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 SPANXN4Q5MJ08 99 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 PHYHD1Q5SRE7 291 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF621Q6ZSS3 439 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 USP51Q70EK9 711 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 H1FNTQ75WM6 255 aaPredicted RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 WDFY1Q8IWB7 410 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 C20orf196Q8IYI0 205 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 TMEM123Q8N131 208 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 OR6N1Q8NGY5 312 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF417Q8TAU3 575 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 PNPT1Q8TCS8 783 aaKnown RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 POP5Q969H6 163 aaKnown RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 KTI12Q96EK9 354 aaPredicted RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 LRR1Q96L50 414 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF75AQ96N20 296 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF587Q96SQ5 575 aaPredicted RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 FOXB1Q99853 325 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 PTDSS2Q9BVG9 487 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ULBP2Q9BZM5 246 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 SAP30LQ9HAJ7 183 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 THAP1Q9NVV9 213 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 NKIRAS2Q9NYR9 191 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 UBAP1Q9NZ09 502 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 P2RX2Q9UBL9 471 aa15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF443Q9Y2A4 671 aaPredicted RBP15.18■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF726A6NNF4 738 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 LCKP06239 509 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 FAM157BP0CG42 384 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 DRD4P21917 467 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 RBBP4Q09028 425 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 BST1Q10588 318 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 FAM69AQ5T7M9 428 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 C5orf46Q6UWT4 87 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 SYT14Q8NB59 555 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 GLB1L3Q8NCI6 653 aaPredicted RBP15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 C11orf40Q8WZ69 217 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms