RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TMEM255BQ8WV15 326 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF426Q9BUY5 554 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 REV1Q9UBZ9 1251 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 BLOC1S6Q9UL45 172 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 ICAM5Q9UMF0 924 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 PROCRQ9UNN8 238 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 ELOA3DA6NLF2 546 aaPredicted RBP18.2■□□□□ 0.5
PSEN1-225ENST00000560005 SCO2O43819 266 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 ZIC3O60481 467 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 FUT4P22083 530 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 RPS4XP62701 263 aaKnown RBP18.2■□□□□ 0.5
PSEN1-225ENST00000560005 ELOA3BQ3SY89 546 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 TMPRSS11FQ6ZWK6 438 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 ELOA3Q8NG57 546 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 DUSP19Q8WTR2 217 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 HDAC2Q92769 488 aaKnown RBP18.2■□□□□ 0.5
PSEN1-225ENST00000560005 OSTF1Q92882 214 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 PLPPR2Q96GM1 343 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 TMEM43Q9BTV4 400 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 PRRG3Q9BZD7 231 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 ZNF696Q9H7X3 374 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 RNF122Q9H9V4 155 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 PCNX3Q9H6A9 2034 aa18.2■□□□□ 0.5
PSEN1-225ENST00000560005 IGLV3-32A0A0A0MS00 114 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 H0YC42 278 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 H3BN98 237 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 NUDT14O95848 222 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 PEPDP12955 493 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 IFI30P13284 250 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 DPP4P27487 766 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 POLR2IP36954 125 aaKnown RBP18.19■□□□□ 0.5
PSEN1-225ENST00000560005 CLDN15P56746 228 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 B3GALT5-AS1P59052 145 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 CXCR4P61073 352 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 ISL1P61371 349 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 IL5RAQ01344 420 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 TEKQ02763 1124 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 ETFDHQ16134 617 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 NDUFAF6Q330K2 333 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 KCTD21Q4G0X4 260 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 RBM48Q5RL73 367 aaKnown RBP18.19■□□□□ 0.5
PSEN1-225ENST00000560005 CBLN3Q6UW01 205 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 FNDC9Q8TBE3 224 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 TEX47Q8TBZ9 253 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 TRUB1Q8WWH5 349 aaKnown RBP18.19■□□□□ 0.5
PSEN1-225ENST00000560005 ST8SIA1Q92185 356 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 C3orf49Q96BT1 292 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 DTNBP1Q96EV8 351 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 ADAM19Q9H013 955 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 BATF3Q9NR55 127 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 IMPAD1Q9NX62 359 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 PPP4R1LQ9P1A2 415 aa18.19■□□□□ 0.5
PSEN1-225ENST00000560005 MRPS18CQ9Y3D5 142 aaKnown RBP18.19■□□□□ 0.5
PSEN1-225ENST00000560005 ZAR1LA6NP61 321 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 B4DXG7 233 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 ADAM11O75078 769 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 CLIC3O95833 236 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 IDUAP35475 653 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 MAP2K6P52564 334 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 PTGES3Q15185 160 aaKnown RBP18.18■□□□□ 0.5
PSEN1-225ENST00000560005 C5orf46Q6UWT4 87 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 CASP12Q6UXS9 341 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 ZNF786Q8N393 782 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 GPR119Q8TDV5 335 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 FBLIM1Q8WUP2 373 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 AKAP1Q92667 903 aaKnown RBP eCLIP18.18■□□□□ 0.5
PSEN1-225ENST00000560005 BPIFA2Q96DR5 249 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 SH3YL1Q96HL8 342 aaPredicted RBP18.18■□□□□ 0.5
PSEN1-225ENST00000560005 FAM46AQ96IP4 442 aaKnown RBP18.18■□□□□ 0.5
PSEN1-225ENST00000560005 TMEM204Q9BSN7 226 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 PRR14LQ5THK1 2151 aa18.18■□□□□ 0.5
PSEN1-225ENST00000560005 UNC119BA6NIH7 251 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 C17orf51A8MQB3 221 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 A8MV72 311 aaPredicted RBP18.17■□□□□ 0.5
PSEN1-225ENST00000560005 SEC14L5O43304 696 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 PPP3CBP16298 524 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 CXCR1P25024 350 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 POU1F1P28069 291 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 SLC9A3P48764 834 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 SUCLG1P53597 346 aaKnown RBP18.17■□□□□ 0.5
PSEN1-225ENST00000560005 GAS1P54826 345 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 MYBPC1Q00872 1141 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 SLX4IPQ5VYV7 408 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 GRINAQ7Z429 371 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 ATG4DQ86TL0 474 aaPredicted RBP18.17■□□□□ 0.5
PSEN1-225ENST00000560005 WFDC8Q8IUA0 241 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 TRMT61AQ96FX7 289 aaKnown RBP18.17■□□□□ 0.5
PSEN1-225ENST00000560005 PTGES2Q9H7Z7 377 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 IL20Q9NYY1 176 aa18.17■□□□□ 0.5
PSEN1-225ENST00000560005 EFCAB9A8MZ26 197 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 HAX1O00165 279 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 OIP5O43482 229 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 CCDC159P0C7I6 412 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 ACVR1BP36896 505 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 GIPRP48546 466 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 POLR2HP52434 150 aaKnown RBP18.16■□□□□ 0.5
PSEN1-225ENST00000560005 PON3Q15166 354 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 GUSBP1Q15486 140 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 ANKDD1AQ495B1 522 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 C6orf141Q5SZD1 244 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms