RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 MMEL1Q495T6 779 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 GLIPR1L2Q4G1C9 344 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 KRT80Q6KB66 452 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 LINGO2Q7L985 606 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 HDDC2Q7Z4H3 204 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 MSRB3Q8IXL7 192 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 SVOPLQ8N434 492 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 CKAP2Q8WWK9 683 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 SLC41A3Q96GZ6 507 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 MPP4Q96JB8 637 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 CGREF1Q99674 301 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 LRMDAQ9H2I8 198 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 KCNN2Q9H2S1 579 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 RNF121Q9H920 327 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 NANSQ9NR45 359 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 MED29Q9NX70 200 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 PRR14LQ5THK1 2151 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 JMJD1CQ15652 2540 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 IGKV1D-42A0A075B6H8 117 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 A0A0G2JND7 137 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 SLC22A23A1A5C7 686 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 TRAPPC13A5PLN9 417 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 CPSF4LA6NMK7 179 aaKnown RBP10.9□□□□□ -0.66
SNX1-209ENST00000559961 TRAF3IP2O43734 574 aaPredicted RBP10.9□□□□□ -0.66
SNX1-209ENST00000559961 SEC14L2O76054 403 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 PTHP01270 115 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 HLA-HP01893 362 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 ADRA2AP08913 450 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 IGHV4-31P0DP07 118 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 IFNGR1P15260 489 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 HOXB9P17482 250 aaPredicted RBP10.9□□□□□ -0.66
SNX1-209ENST00000559961 CALCRP30988 508 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 EVX1P49640 407 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 BIDP55957 195 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 RAB1AP62820 205 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 NPTX1Q15818 432 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 ENTPD8Q5MY95 495 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 METTL21CQ5VZV1 264 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 TMEM53Q6P2H8 277 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 DLEU7Q6UYE1 221 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 SLC35D2Q76EJ3 337 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 PIWIL3Q7Z3Z3 882 aaKnown RBP10.9□□□□□ -0.66
SNX1-209ENST00000559961 DPPA2Q7Z7J5 298 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 TMEM123Q8N131 208 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 DPP10Q8N608 796 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 VANGL1Q8TAA9 524 aaPredicted RBP10.9□□□□□ -0.66
SNX1-209ENST00000559961 UBASH3BQ8TF42 649 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 ZNF566Q969W8 418 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 FOXB1Q99853 325 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 ECSITQ9BQ95 431 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
SNX1-209ENST00000559961 SLC19A3Q9BZV2 496 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 NPHS2Q9NP85 383 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 REV1Q9UBZ9 1251 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 CADP27708 2225 aa10.9□□□□□ -0.66
SNX1-209ENST00000559961 NSD1Q96L73 2696 aaPredicted RBP10.9□□□□□ -0.67
SNX1-209ENST00000559961 A0A1W2PRG6 482 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 MCIDASD6RGH6 385 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 M0R233 179 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 M0R3H8 397 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 SYNGR3O43761 229 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 FZD7O75084 574 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 STAMBPO95630 424 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 CH25HO95992 272 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 BCL10O95999 233 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 HPRP00739 348 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 CELA3BP08861 270 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 OR8G3PP0DMU2 310 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 TROVE2P10155 538 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNX1-209ENST00000559961 HLA-DOBP13765 273 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 B4GALT1P15291 398 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 ZNF23P17027 643 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 NR4A1P22736 598 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 ZNF84P51523 738 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 CLRN1P58418 232 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 MTPNP58546 118 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 HGFACQ04756 655 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 PLP2Q04941 152 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 MOGQ16653 247 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 LIPNQ5VXI9 398 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 NANOGNBQ7Z5D8 188 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 OR1J2Q8NGS2 313 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 OR6X1Q8NH79 312 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 THOC1Q96FV9 657 aaKnown RBP10.89□□□□□ -0.67
SNX1-209ENST00000559961 TXNDC15Q96J42 360 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 MOGAT1Q96PD6 335 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 ARHGDIGQ99819 225 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 C1orf198Q9H425 327 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 NOX3Q9HBY0 568 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 GLTPQ9NZD2 209 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 STX18Q9P2W9 335 aaKnown RBP10.89□□□□□ -0.67
SNX1-209ENST00000559961 ZNF229Q9UJW7 825 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 BAG5Q9UL15 447 aa10.89□□□□□ -0.67
SNX1-209ENST00000559961 ZNF346Q9UL40 294 aaKnown RBP10.89□□□□□ -0.67
SNX1-209ENST00000559961 A0A096LNT2 108 aa10.88□□□□□ -0.67
SNX1-209ENST00000559961 TRBV5-3A0A0A0MS03 114 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms