RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 MYBPC1Q00872 1141 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 MMEL1Q495T6 779 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 GTDC1Q4AE62 458 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 TNFAIP8L3Q5GJ75 292 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ELFN2Q5R3F8 820 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 PHYHD1Q5SRE7 291 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 REEP3Q6NUK4 255 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 FAHD2BQ6P2I3 314 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 DHRS4L2Q6PKH6 230 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF627Q7L945 461 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 PIWIL3Q7Z3Z3 882 aaKnown RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 PXKQ7Z7A4 578 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 C10orf53Q8N6V4 93 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 CLDND2Q8NHS1 167 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 GTF2H4Q92759 462 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 MAL2Q969L2 176 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 VPS33AQ96AX1 596 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 FAHD2AQ96GK7 314 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 SLC41A3Q96GZ6 507 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF607Q96SK3 696 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 FOXB1Q99853 325 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF416Q9BWM5 594 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ULBP2Q9BZM5 246 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF346Q9UL40 294 aaKnown RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 IGKV1D-42A0A075B6H8 117 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 A0A1W2PPW3 197 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 PPIHO43447 177 aaKnown RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 SNNO75324 88 aaPredicted RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 OR6A2O95222 327 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 VENTXO95231 258 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 MT-ATP6P00846 226 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 HPXP02790 462 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 SERPINA5P05154 406 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 HLA-DOBP13765 273 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 PPIBP23284 216 aaKnown RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 AHCYP23526 432 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 CFPP27918 469 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 HTR2AP28223 471 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 ALDH3B1P43353 468 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 GIPRP48546 466 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 SEC24CP53992 1094 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 AQP5P55064 265 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 STX1BP61266 288 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 CDK6Q00534 326 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 PUDPQ08623 228 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 CAMK2DQ13557 499 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 FXNQ16595 210 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 MOGQ16653 247 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 GLIPR1L2Q4G1C9 344 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 GCNT6Q5T4J0 391 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 DPPA2Q7Z7J5 298 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 OR51F2Q8NH61 342 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 GCDHQ92947 438 aaPredicted RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 ZMYND19Q96E35 227 aaPredicted RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 MS4A3Q96HJ5 214 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 TXNDC15Q96J42 360 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF75AQ96N20 296 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 LRRC37BQ96QE4 947 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 JMJD8Q96S16 334 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 PARD6BQ9BYG5 372 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 PLA2G12AQ9BZM1 189 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 PAIP1Q9H074 479 aaKnown RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 RACGAP1Q9H0H5 632 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 LRMDAQ9H2I8 198 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF385DQ9H6B1 395 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 MED29Q9NX70 200 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 MRPL39Q9NYK5 338 aaKnown RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 NKIRAS1Q9NYS0 192 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 TREM2Q9NZC2 230 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 KLHL14Q9P2G3 628 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 TESQ9UGI8 421 aaKnown RBP7.88□□□□□ -1.15
HDDC3-204ENST00000559834 SLC7A8Q9UHI5 535 aa7.88□□□□□ -1.15
HDDC3-204ENST00000559834 TMEM120BA0PK00 339 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 TRIM77I1YAP6 450 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 PLPP3O14495 311 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SPRY1O43609 319 aaPredicted RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 TPST1O60507 370 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 FARS2O95363 451 aaKnown RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 HPRP00739 348 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 PTHP01270 115 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 BGLAPP02818 100 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 VIMP08670 466 aaKnown RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 ADORA3P0DMS8 318 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 OR8G3PP0DMU2 310 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 GAAP10253 952 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 ARAFP10398 606 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 B4GALT1P15291 398 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SLC6A2P23975 617 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 RAD52P43351 418 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 CSNK1A1P48729 337 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SLC18A1P54219 525 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 WDR4P57081 412 aaKnown RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 RGS8P57771 180 aaPredicted RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 ACTG1P63261 375 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 TEKQ02763 1124 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 RAB39AQ14964 217 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms