RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 IGKV1D-16P01601 117 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 RLN1P04808 185 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF35P13682 527 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 SDHAP31040 664 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 WASP42768 502 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 TPMTP51580 245 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 MAZP56270 477 aaKnown RBP14.82□□□□□ -0.04
SHMT2-231ENST00000557433 ACTBP60709 375 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 ACTG1P63261 375 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 NFATC4Q14934 902 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 CSRP2Q16527 193 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 SFRP5Q5T4F7 317 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 FAAP20Q6NZ36 180 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 FAM122BQ7Z309 247 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 OR5M1Q8NGP8 315 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 OR1S1Q8NH92 325 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 TNFAIP8L1Q8WVP5 186 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 OR1E3Q8WZA6 343 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 FGF13Q92913 245 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 RIT1Q92963 219 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF107Q9UII5 783 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-231ENST00000557433 A0A1B0GVT2 93 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 A6NCN8 305 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 H3BUI4 141 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 GOSR2O14653 212 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 APBB3O95704 486 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 OR8G3PP0DMU2 310 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 MGMTP16455 207 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 NAT1P18440 290 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 RPS15P62841 145 aaKnown RBP14.82□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF660Q6AZW8 331 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-231ENST00000557433 FDX2Q6P4F2 183 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 CSNK1A1LQ8N752 337 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF454Q8N9F8 522 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 C7orf57Q8NEG2 295 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 C3orf49Q96BT1 292 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 WDR92Q96MX6 357 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 OR1F2PQ96R84 312 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 SLC25A21Q9BQT8 299 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-231ENST00000557433 MFFQ9GZY8 342 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 SLC6A15Q9H2J7 730 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 WDR76Q9H967 626 aa14.82□□□□□ -0.04
SHMT2-231ENST00000557433 PDE4DIPQ5VU43 2346 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 TMEM72A0PK05 275 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 OR6C74A6NCV1 312 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 PRR32B1ATL7 298 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 ATP6V1G2-DDX39BF2Z307 99 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 C5orf67F2Z3F1 127 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 TNFRSF10CO14798 259 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 CTAG2O75638 210 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 HPP00738 406 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 POU3F2P20265 443 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-231ENST00000557433 PRSS3P35030 304 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 ACTR1BP42025 376 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 CDKN2AP42771 156 aaKnown RBP14.81□□□□□ -0.04
SHMT2-231ENST00000557433 ADPRHP54922 357 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 ACTR1AP61163 376 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 CCINQ13939 588 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 CLVS2Q5SYC1 327 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 LPCAT3Q6P1A2 487 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 ENPP7Q6UWV6 458 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 MUC20Q8N307 709 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-231ENST00000557433 LRRC75AQ8NAA5 344 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 OR52B4Q8NGK2 314 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 OR2G2Q8NGZ5 317 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 ZPLD1Q8TCW7 415 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 HMGB4Q8WW32 186 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 FAM3CQ92520 227 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 MCHR2Q969V1 340 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 POTEKPQ9BYX7 375 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 SLCO5A1Q9H2Y9 848 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 LAMP5Q9UJQ1 280 aa14.81□□□□□ -0.04
SHMT2-231ENST00000557433 A0A0J9YY10 115 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ELOA3DA6NLF2 546 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-231ENST00000557433 PRAMEF2O60811 474 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 RPP14O95059 124 aaKnown RBP14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ITGB2P05107 769 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 GTF2F2P13984 249 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 MPGP29372 298 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF74Q16587 644 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ELOA3BQ3SY89 546 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 STPG1Q5TH74 334 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 WBP2NLQ6ICG8 309 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 PRSS41Q7RTY9 318 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 STPG2Q8N412 459 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF676Q8N7Q3 588 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ZNF511Q8NB15 262 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ELOA3Q8NG57 546 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 OR5T3Q8NGG3 340 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 Q96M85 177 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 SCPEP1Q9HB40 452 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 TMEM138Q9NPI0 162 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 TBC1D3DA0A087WVF3 549 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 TBC1D3LB9A6J9 549 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 GNB5O14775 395 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 TBC1D3HP0C7X1 549 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 FCARP24071 287 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 ADH7P40394 386 aa14.8□□□□□ -0.04
SHMT2-231ENST00000557433 SOX2P48431 317 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms