RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CLIC3O95833 236 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 C1QBP02746 253 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 GLAP06280 429 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 HLXQ14774 488 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TESK1Q15569 626 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 FBXL22Q6P050 247 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF343Q6P1L6 599 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CLEC20AQ6ZU45 233 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SLC39A11Q8N1S5 342 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OR2AE1Q8NHA4 323 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 IKZF5Q9H5V7 419 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 MTCH1Q9NZJ7 389 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 KIAA1217Q5T5P2 1943 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 RRASP10301 218 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 PCBP2Q15366 365 aaKnown RBP eCLIP8.23□□□□□ -1.092e-6■■■■■ 29.7
SYNE3-205ENST00000557275 CTU2Q2VPK5 515 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 GPR152Q8TDT2 470 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 INSL6Q9Y581 213 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CORINQ9Y5Q5 1042 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 HYAL2Q12891 473 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ASB11Q8WXH4 323 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 BCL2L2Q92843 193 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 PLK3Q9H4B4 646 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ACSS2Q9NR19 701 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CAPNS1P04632 268 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SLC25A6P12236 298 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 APEX1P27695 318 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CCR7P32248 378 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 PRRT3Q5FWE3 981 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 LYSMD2Q8IV50 215 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 NETO1Q8TDF5 533 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF724A8MTY0 619 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OR7C1O76099 320 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 PPP1R3DO95685 299 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ANKRD16Q6P6B7 361 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OR10C1Q96KK4 312 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 IAH1Q2TAA2 248 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 TFAP2EQ6VUC0 442 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SLC16A14Q7RTX9 510 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SECTM1Q8WVN6 248 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ST8SIA4Q92187 359 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 DDOQ99489 341 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 DUSP23Q9BVJ7 150 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ETV3P41162 512 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 VGLL4Q14135 290 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM19Q96HH6 336 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GABRPO00591 440 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 LDB2O43679 373 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF217O75362 1048 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 DBHP09172 617 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 PTHLHP12272 177 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 IKZF1Q13422 519 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 C2orf27AQ580R0 203 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 TSEN54Q7Z6J9 526 aaKnown RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 FAM71F1Q96KD3 344 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 MSLNLQ96KJ4 702 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ATP13A2Q9NQ11 1180 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 HIST1H1BP16401 226 aaKnown RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 RGMBQ6NW40 437 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 MMP21Q8N119 569 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 POFUT1Q9H488 388 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF629Q9UEG4 869 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GIMAP2Q9UG22 337 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 YJEFN3A6XGL0 299 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 CHRM4P08173 479 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SSTR2P30874 369 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 DHODHQ02127 395 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF534Q76KX8 674 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 NECTIN4Q96NY8 510 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SMOQ99835 787 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 RIMS3Q9UJD0 308 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ADAMTS6Q9UKP5 1117 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 RCE1Q9Y256 329 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 EMC9Q9Y3B6 208 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SPATA31D1Q6ZQQ2 1576 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 WNK1Q9H4A3 2382 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 DDTLA6NHG4 134 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 CCL22O00626 93 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GPR171O14626 319 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 LAMP1P11279 417 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 CPZQ66K79 652 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM135Q86UB9 458 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 OR6M1Q8NGM8 313 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 BET1O15155 118 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 PHF1O43189 567 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 HMGCLP35914 325 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GATMP50440 423 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 MTCP1P56278 107 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ETFRF1Q6IPR1 90 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 CLEC9AQ6UXN8 241 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 KRTCAP2Q8N6L1 136 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 MENTQ9BUN1 341 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 CACNA1HO95180 2353 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 CD1DP15813 335 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 PMCHP20382 165 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 920 ms