RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 AHCYP23526 432 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 PUDPQ08623 228 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 SNTB2Q13425 540 aaKnown RBP13.73□□□□□ -0.21
TUBB3-213ENST00000557262 CAMK2DQ13557 499 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 SQLEQ14534 574 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 GSG1Q2KHT4 349 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 FAM120AOSQ5T036 256 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
TUBB3-213ENST00000557262 KRT80Q6KB66 452 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 LINC00114Q6XXX2 140 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF813Q6ZN06 617 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 OR6N1Q8NGY5 312 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 MCHR1Q99705 422 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 RABEP2Q9H5N1 569 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 DENND2DQ9H6A0 471 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-213ENST00000557262 NOX3Q9HBY0 568 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 DYNLRB1Q9NP97 96 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 SPEF1Q9Y4P9 236 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 SVEP1Q4LDE5 3571 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 LRRN3E7EW58 273 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 M0QX08 132 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 FMO6PO60774 539 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 MT-ATP6P00846 226 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 C8BP07358 591 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 ADRA2AP08913 450 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 HNF1AP20823 631 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 EVX1P49640 407 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 PIGFQ07326 219 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 RBBP4Q09028 425 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 DUSP7Q16829 419 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF613Q6PF04 617 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 SMYD1Q8NB12 490 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 C11orf65Q8NCR3 313 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 OR5J2Q8NH18 312 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 ATP6V1G3Q96LB4 118 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF75AQ96N20 296 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 CPPED1Q9BRF8 314 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-213ENST00000557262 ULBP2Q9BZM5 246 aa13.72□□□□□ -0.21
TUBB3-213ENST00000557262 LEF1Q9UJU2 399 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-213ENST00000557262 LRP5LA4QPB2 252 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 LILRA1O75019 489 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 IGFBP1P08833 259 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-213ENST00000557262 TACSTD2P09758 323 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 ADORA3P0DMS8 318 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF35P13682 527 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF14P17017 642 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-213ENST00000557262 CHN2P52757 468 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 PCBP3P57721 371 aaKnown RBP13.71□□□□□ -0.21
TUBB3-213ENST00000557262 RAB1AP62820 205 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.21
TUBB3-213ENST00000557262 IL17RELQ6ZVW7 336 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 PTOV1Q86YD1 416 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 DYDC1Q8WWB3 177 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 HPS1Q92902 700 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 ARHGDIGQ99819 225 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 FOXB1Q99853 325 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 NDUFAF1Q9Y375 327 aa13.71□□□□□ -0.21
TUBB3-213ENST00000557262 C11orf98E9PRG8 122 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 M0R3H8 397 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 CHP2O43745 196 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 SYNGR3O43761 229 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 SERPINI2O75830 405 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 OR6A2O95222 327 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 B4GALT1P15291 398 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 GLRXP35754 106 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 PTDSS1P48651 473 aaKnown RBP13.7□□□□□ -0.22
TUBB3-213ENST00000557262 CSNK1A1P48729 337 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 ZP4Q12836 540 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 KRTAP24-1Q3LI83 254 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 ENTPD8Q5MY95 495 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 PIWIL3Q7Z3Z3 882 aaKnown RBP13.7□□□□□ -0.22
TUBB3-213ENST00000557262 DPP10Q8N608 796 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
TUBB3-213ENST00000557262 CGREF1Q99674 301 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 SOX7Q9BT81 388 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 MRPL37Q9BZE1 423 aaKnown RBP13.7□□□□□ -0.22
TUBB3-213ENST00000557262 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF224Q9NZL3 707 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 REV1Q9UBZ9 1251 aa13.7□□□□□ -0.22
TUBB3-213ENST00000557262 UBL3O95164 117 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 RAB36O95755 333 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 IFNGR1P15260 489 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 GIPRP48546 466 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 BIDP55957 195 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 RIN1Q13671 783 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 NPTX1Q15818 432 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 CYP51A1Q16850 503 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 MSMPQ1L6U9 139 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 CR1LQ2VPA4 569 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 TTC33Q6PID6 262 aaPredicted RBP13.69□□□□□ -0.22
TUBB3-213ENST00000557262 UGT2A3Q6UWM9 527 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 SLC35D2Q76EJ3 337 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms