RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 EMC6Q9BV81 110 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 ULBP2Q9BZM5 246 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 AMBRA1Q9C0C7 1298 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 FAIMQ9NVQ4 179 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 BEX4Q9NWD9 120 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-207ENST00000556831 MED29Q9NX70 200 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 STX18Q9P2W9 335 aaKnown RBP12.37□□□□□ -0.43
SLIRP-207ENST00000556831 RHCGQ9UBD6 479 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 SLC25A15Q9Y619 301 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 V9GYQ6 96 aa12.37□□□□□ -0.43
SLIRP-207ENST00000556831 B2RBV5 119 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 BCL10O95999 233 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 HLA-DOBP13765 273 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 IFNGR1P15260 489 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 CDH11P55287 796 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 FOXG1P55316 489 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-207ENST00000556831 LGALS3BPQ08380 585 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 CAMK2DQ13557 499 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 CEACAM16Q2WEN9 425 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 TBRG1Q3YBR2 411 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 SLC22A25Q6T423 547 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 SLC35D2Q76EJ3 337 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 ARHGAP24Q8N264 748 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 LRRC17Q8N6Y2 441 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 ZNF566Q969W8 418 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 BPIFA2Q96DR5 249 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 LRR1Q96L50 414 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 CXorf56Q9H5V9 222 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 GORASP2Q9H8Y8 452 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 MEPEQ9NQ76 525 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-207ENST00000556831 DCAF13Q9NV06 445 aaKnown RBP12.36□□□□□ -0.43
SLIRP-207ENST00000556831 POFUT2Q9Y2G5 429 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 ENPP4Q9Y6X5 453 aa12.36□□□□□ -0.43
SLIRP-207ENST00000556831 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 A0A096LPE4 126 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ANKRD65E5RJM6 399 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 RPL36A-HNRNPH2H7BZ11 118 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 J3KTA2 159 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ARPC2O15144 300 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ZNF432O94892 652 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 IGHG1P01857 330 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 H1F0P07305 194 aaKnown RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 NR2C1P13056 603 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 HOXB1P14653 301 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 CD53P19397 219 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 CLRN1P58418 232 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ARF1P84077 181 aaKnown RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ZP4Q12836 540 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 SLC46A3Q7Z3Q1 461 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 NRMQ8IXM6 262 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 RNF113BQ8IZP6 322 aaKnown RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ZNF611Q8N823 705 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 KBTBD8Q8NFY9 601 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 OR6X1Q8NH79 312 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ACOT11Q8WXI4 607 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-207ENST00000556831 TMEM204Q9BSN7 226 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 ANKRD19PQ9H560 264 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 INIPQ9NRY2 104 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 NPAP1Q9NZP6 1156 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 TMEM5Q9Y2B1 443 aa12.35□□□□□ -0.43
SLIRP-207ENST00000556831 DPRXA6NFQ7 191 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 EFCAB9A8MZ26 197 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 PIP5K1CO60331 668 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 TMCC2O75069 709 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 PLAUP00749 431 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 RHCEP18577 417 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 CD40P25942 277 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 SMIM11AP58511 58 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 MELKQ14680 651 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 ZNF672Q499Z4 452 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 ALG10Q5BKT4 473 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 SEZ6L2Q6UXD5 910 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 OAFQ86UD1 273 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 RBM15BQ8NDT2 890 aaKnown RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 MAGEE2Q8TD90 523 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 GTPBP3Q969Y2 492 aaKnown RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 PYURFQ96I23 114 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 TXNDC15Q96J42 360 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 PIP5K1AQ99755 562 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 TAS2R5Q9NYW4 299 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 RAI1Q7Z5J4 1906 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-207ENST00000556831 ROS1P08922 2347 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 ATRQ13535 2644 aa12.34□□□□□ -0.43
SLIRP-207ENST00000556831 ARPC4-TTLL3A0A0A6YYG9 625 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms