RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 POC1BQ8TC44 478 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 THAP4Q8WY91 577 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 SIAEQ9HAT2 523 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 CACNA1HO95180 2353 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 A0A075B6Q4 140 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 TNFRSF10AO00220 468 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 TP53I11O14683 189 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 RPL27P61353 136 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 IL10RAQ13651 578 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 RPS19BP1Q86WX3 136 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 FAM83FQ8NEG4 500 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 OR4K17Q8NGC6 315 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 GHSRQ92847 366 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 DDIT4LQ96D03 193 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 WDR76Q9H967 626 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 ING1Q9UK53 422 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 KLHDC2Q9Y2U9 406 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 PLPP2O43688 288 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 CCL3P10147 92 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 GPR50Q13585 617 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 SPANXN2Q5MJ10 180 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 ZNF468Q5VIY5 522 aaPredicted RBP16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 TMEM156Q8N614 296 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 MINDY2Q8NBR6 621 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 OR2T4Q8NH00 348 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 ST6GALNAC2Q9UJ37 374 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 RPH3AQ9Y2J0 694 aaPredicted RBP16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 PCDHGB6Q9Y5F9 930 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 CPAMD8Q8IZJ3 1885 aa16.49■□□□□ 0.23
SDR39U1-220ENST00000556548 A0A1W2PPK0 400 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MS4A18H0YCH9 400 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MT-CO3P00414 261 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MSX1P28360 303 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 SSR4P51571 173 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ACTA2P62736 377 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ACTG2P63267 376 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ETFDHQ16134 617 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MS4A18Q3C1V0 323 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 CDONQ4KMG0 1287 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 NXPE2Q96DL1 559 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 PGLYRP3Q96LB9 341 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ADAD1Q96M93 576 aaKnown RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 JSRP1Q96MG2 331 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 TSPAN10Q9H1Z9 355 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ABCB9Q9NP78 766 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MRPL39Q9NYK5 338 aaKnown RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 FARSAQ9Y285 508 aaKnown RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 TAF4O00268 1085 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 AKR7A3O95154 331 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 HLA-DQA2P01906 255 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 SHC1P29353 583 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 GBX2P52951 348 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 Q0VFX4 171 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 B3GNTL1Q67FW5 361 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 DMKNQ6E0U4 476 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 OPN5Q6U736 354 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 CEACAM19Q7Z692 300 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 CCDC190Q86UF4 302 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 WDFY1Q8IWB7 410 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 OR6N2Q8NGY6 317 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ABHD4Q8TB40 342 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 ZNF519Q8TB69 540 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MED18Q9BUE0 208 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 TXNIPQ9H3M7 391 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 MOKQ9UQ07 419 aa16.48■□□□□ 0.23
SDR39U1-220ENST00000556548 A0A1W2PNR3 127 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 PRSS37A4D1T9 235 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 SLC16A7O60669 478 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 RPP14O95059 124 aaKnown RBP16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 SNX4O95219 450 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 DLGAP3O95886 979 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 EDNRAP25101 427 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 TAS2R43P59537 309 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 SIRPAP78324 504 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 PUDPQ08623 228 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 DNASE1L3Q13609 305 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 FAM209AQ5JX71 171 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 AGAP7PQ5VUJ5 663 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 SLC16A9Q7RTY1 509 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 TIGD4Q8IY51 512 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 C5orf34Q96MH7 638 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 GNRHR2Q96P88 292 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 UBL7Q96S82 380 aaPredicted RBP16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 COQ7Q99807 217 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 PDCD1LG2Q9BQ51 273 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 SLC30A2Q9BRI3 323 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 MED12Q93074 2177 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 EML6Q6ZMW3 1958 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 IGLV3-32A0A0A0MS00 114 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 F8A1P23610 371 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 SFTPDP35247 375 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 ZNF45Q02386 682 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 TLE3Q04726 772 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 MYBPHQ13203 477 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 EEF1A1P5Q5VTE0 462 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 C5orf46Q6UWT4 87 aa16.47■□□□□ 0.23
SDR39U1-220ENST00000556548 DPY19L4Q7Z388 723 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms