RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 KITLGP21583 273 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 CALCRP30988 508 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 PFN3P60673 137 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 ARHGAP19Q14CB8 494 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 PSG5Q15238 335 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 XKR7Q5GH72 579 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 TSPO2Q5TGU0 170 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 CLEC2AQ6UVW9 174 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM107Q6UX40 140 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 ZFP2Q6ZN57 461 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM61Q8N0U2 210 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 GTPBP8Q8N3Z3 284 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 OR6X1Q8NH79 312 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 FANK1Q8TC84 345 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 ELMO1Q92556 727 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 NDRG1Q92597 394 aaKnown RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 FGF11Q92914 225 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.7□□□□□ -1.982e-9■■■■■ 43.2
SCFD1-221ENST00000556534 CXorf40BQ96DE9 158 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 PAGE5Q96GU1 130 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 FCRL1Q96LA6 429 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 CLCC1Q96S66 551 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 PPA2Q9H2U2 334 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 EXO5Q9H790 373 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 NIPAL2Q9H841 368 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 CCL28Q9NRJ3 127 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 RBAKQ9NYW8 714 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 NUFIP1Q9UHK0 495 aaKnown RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 KIAA1257Q9ULG3 409 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 PEX16Q9Y5Y5 336 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 SYNRGQ9UMZ2 1314 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 IGKV2D-24A0A075B6R9 120 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 A0A096LNJ9 63 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 GOLGA6L7A0A1B0GV03 622 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 H0YIV9 168 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 GOLGA8SH3BPF8 625 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 TMX2-CTNND1H3BSU7 103 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 CASQ2O14958 399 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 AGPAT2O15120 278 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 MBTPS2O43462 519 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 DNAJB6O75190 326 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 WBP4O75554 376 aaKnown RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 C1orf105O95561 183 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 GIPP09681 153 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 MCF2P10911 925 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 RFC4P35249 363 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 FDFT1P37268 417 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 VDAC2P45880 294 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 CRISP3P54108 245 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 CDH6P55285 790 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 PARP15Q460N3 678 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 TIGD3Q6B0B8 471 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM220Q6QAJ8 160 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 C19orf35Q6ZS72 473 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 BIVMQ86UB2 503 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 PSTKQ8IV42 348 aaKnown RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 CCDC65Q8IXS2 484 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 OFCC1Q8IZS5 231 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 OR4F6Q8NGB9 312 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 OR4K14Q8NGD5 310 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 UFD1Q92890 307 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 SEC22AQ96IW7 307 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 PLEKHA8Q96JA3 519 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF641Q96N77 438 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 CHP1Q99653 195 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 NAT9Q9BTE0 207 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 VCXQ9H320 206 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 REEP4Q9H6H4 257 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM185BQ9H7F4 350 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 NHEJ1Q9H9Q4 299 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-221ENST00000556534 HOXC10Q9NYD6 342 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 BFARQ9NZS9 450 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 IKZF2Q9UKS7 526 aa2.69□□□□□ -1.98
SCFD1-221ENST00000556534 IGLV4-69A0A075B6H9 119 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 IQANK1A0A1B0GTG1 560 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 A8MXQ7 604 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 DLGAP1O14490 977 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 CDH16O75309 829 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF324O75467 553 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 OXSR1O95747 527 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 KRT14P02533 472 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 TROVE2P10155 538 aaKnown RBP eCLIP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 ADRB3P13945 408 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF43P17038 809 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 MAGP20916 626 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 CHMLP26374 656 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 SYKP43405 635 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 HERVK_113P61574 105 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 OXA1LQ15070 435 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 PTGES3Q15185 160 aaKnown RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 RAET1LQ5VY80 246 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 LRRC31Q6UY01 552 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 PGAP1Q75T13 922 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 BZW1Q7L1Q6 419 aaKnown RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF571Q7Z3V5 609 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 LINC01551Q86U37 167 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 TPRX1Q8N7U7 411 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 STARD8Q92502 1023 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 PEX13Q92968 403 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 BPIFA3Q9BQP9 254 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms