RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	ACTG2	P63267	376 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	GRM7	Q14831	915 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	TSSK4	Q6SA08	328 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ELP5	Q8TE02	316 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MAP3K3	Q99759	626 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRMT8	Q9NR22	394 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	BABAM2	Q9NXR7	383 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC6A5	Q9Y345	797 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ASB4	Q9Y574	426 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029		A0A0J9YY10	115 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRKN	O60260	465 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	EPPIN	O95925	133 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	GAA	P10253	952 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	HTR1F	P30939	366 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	EVX1	P49640	407 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MNX1	P50219	401 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	CCR6	P51684	374 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MC2R	Q01718	297 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SRY	Q05066	204 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	DUSP2	Q05923	314 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	FUT5	Q11128	374 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PXDC1	Q5TGL8	231 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	KIAA0895L	Q68EN5	471 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC16A11	Q8NCK7	471 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ST7L	Q8TDW4	575 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	NINJ1	Q92982	152 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	LRIT1	Q9P2V4	623 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRODH2	Q9UF12	536 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	OR2W5	A6NFC9	320 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC34A2	O95436	690 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	IFNA5	P01569	189 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	JMJD7	P0C870	316 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PET100	P0DJ07	73 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MYF5	P13349	255 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	OMG	P23515	440 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	CFL1	P23528	166 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SEC61A1	P61619	476 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ECH1	Q13011	328 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC9A3R2	Q15599	337 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	METTL11B	Q5VVY1	283 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MBOAT2	Q6ZWT7	520 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	COX15	Q7KZN9	410 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ACBD4	Q8NC06	268 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	OR5D18	Q8NGL1	313 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	OR5H2	Q8NGV7	314 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MR1	Q95460	341 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRDM7	Q9NQW5	492 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ASB6	Q9NWX5	421 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF175	Q9Y473	711 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SCN3A	Q9NY46	2000 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	OR6C65	A6NJZ3	312 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	DUX1	O43812	170 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	FADS1	O60427	444 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC16A7	O60669	478 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	COL9A1	P20849	921 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PKLR	P30613	574 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	FAP	Q12884	760 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MLF2	Q15773	248 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	AKR1C8P	Q5T2L2	129 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRAMEF8	Q5VWM4	474 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRAMEF7	Q5VXH5	474 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	LYPD4	Q6UWN0	246 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PRSS45	Q7RTY3	260 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ABI3BP	Q7Z7G0	1075 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	TMEM234	Q8WY98	164 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	ARHGDIG	Q99819	225 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	G6PC3	Q9BUM1	346 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	C1QTNF2	Q9BXJ5	285 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PARP12	Q9H0J9	701 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	UBE2Z	Q9H832	354 aa	Predicted RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	KCNJ16	Q9NPI9	418 aa		11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	HINT3	Q9NQE9	182 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	MRPS18A	Q9NVS2	196 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	DHCR7	Q9UBM7	475 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	SF3B6	Q9Y3B4	125 aa	Known RBP	11.3	□□□□□ -0.6
TMPO-212	ENST00000556029	PLXNA2	O75051	1894 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	PRKAR1B	P31321	381 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	PPT1	P50897	306 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ACTB	P60709	375 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ACTG1	P63261	375 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	PPA1	Q15181	289 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF674	Q2M3X9	581 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	FAM181A	Q8N9Y4	354 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	OR52N1	Q8NH53	320 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	SLC35A4	Q96G79	324 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	NUDT22	Q9BRQ3	303 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	TMEM43	Q9BTV4	400 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	MED17	Q9NVC6	651 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ZC3H12D	A2A288	527 aa	Known RBP	11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	APBB3	O95704	486 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	GNB3	P16520	340 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	BAIAP2L2	Q6UXY1	529 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ZNF620	Q6ZNG0	422 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	SYT9	Q86SS6	491 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	ARL14	Q8N4G2	192 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	TOR1AIP2	Q8NFQ8	470 aa		11.29	□□□□□ -0.6
TMPO-212	ENST00000556029	GIMAP1	Q8WWP7	306 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms