RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GSG1Q2KHT4 349 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 TRMT5Q32P41 509 aaKnown RBP6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 IQCCQ4KMZ1 466 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 INTS11Q5TA45 600 aaKnown RBP6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 SPATA21Q7Z572 469 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 PATL1Q86TB9 770 aaKnown RBP6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 PHC2Q8IXK0 858 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 OR5J2Q8NH18 312 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 OR6X1Q8NH79 312 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 MRPL24Q96A35 216 aaKnown RBP6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF837Q96EG3 531 aaPredicted RBP6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 ARHGDIGQ99819 225 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 FOXB1Q99853 325 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 EBF4Q9BQW3 602 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 SIKE1Q9BRV8 207 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 BPESC1Q9GZL8 116 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 PCDHAC1Q9H158 963 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 NOX3Q9HBY0 568 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 SLCO1B3Q9NPD5 702 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 ANGPT4Q9Y264 503 aa6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.73□□□□□ -1.33
PTCSC3-201ENST00000556013 IGHV4-61A0A0C4DH41 118 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 M0R3G1 203 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 PHF1O43189 567 aaPredicted RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 LY6HO94772 140 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 OR6A2O95222 327 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 TGFAP01135 160 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 NPPAP01160 153 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 PTHP01270 115 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 SERPINA5P05154 406 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ADORA3P0DMS8 318 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 HLA-DOBP13765 273 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF14P17017 642 aaPredicted RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 SRD5A1P18405 259 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 IGFBP5P24593 272 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 LSP1P33241 339 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 AQP5P55064 265 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 CDH12P55289 794 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 MOGQ16653 247 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 GLIPR1L2Q4G1C9 344 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 AGKQ53H12 422 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 FAM120AOSQ5T036 256 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 TTC33Q6PID6 262 aaPredicted RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 VHLLQ6RSH7 139 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF813Q6ZN06 617 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 MDP1Q86V88 176 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 C1orf174Q8IYL3 243 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 C10orf111Q8N326 155 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 RFLNBQ8N5W9 214 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 LINC01356Q8N9X3 169 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 OR6N1Q8NGY5 312 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 CKAP2Q8WWK9 683 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 HTRA1Q92743 480 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 TMEM54Q969K7 222 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 SLC25A44Q96H78 314 aaPredicted RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ATP6V1G3Q96LB4 118 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 CGREF1Q99674 301 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 MCHR1Q99705 422 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF426Q9BUY5 554 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ULBP2Q9BZM5 246 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 POLR2J2Q9GZM3 115 aaKnown RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 POLR2J3Q9H1A7 115 aaKnown RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 C1orf198Q9H425 327 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 IKZF5Q9H5V7 419 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF385DQ9H6B1 395 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 KAT8Q9H7Z6 458 aaKnown RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 NANSQ9NR45 359 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 GLTPQ9NZD2 209 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 STX18Q9P2W9 335 aaKnown RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 REV1Q9UBZ9 1251 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 SEC14L4Q9UDX3 406 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 SLC7A8Q9UHI5 535 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 GPR160Q9UJ42 338 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF346Q9UL40 294 aaKnown RBP6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 MXRA5Q9NR99 2828 aa6.72□□□□□ -1.33
PTCSC3-201ENST00000556013 A0A0A6YYJ9 748 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 TRAPPC13A5PLN9 417 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 ZNF503-AS2A6NEH8 195 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 M0R233 179 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 FARS2O95363 451 aaKnown RBP6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 RAB36O95755 333 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 HPRP00739 348 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 IGFBP1P08833 259 aaPredicted RBP6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 CELA3BP08861 270 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 ASAH2BP0C7U1 165 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 OR8G3PP0DMU2 310 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 CD79AP11912 226 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 ACHEP22303 614 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 AHCYP23526 432 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 CAPZA2P47755 286 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 CSNK1A1P48729 337 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 DVL1P1P54792 670 aaPredicted RBP6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 SELENOVP59797 346 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 TUBA1BP68363 451 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 TUBA4AP68366 448 aa6.71□□□□□ -1.34
PTCSC3-201ENST00000556013 GALK2Q01415 458 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms