RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CDC20Q12834 499 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 RIPK1Q13546 671 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 SELPLGQ14242 412 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 TPD52L1Q16890 204 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 MICBQ29980 383 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 PARP15Q460N3 678 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 TMEM41BQ5BJD5 291 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 PYHIN1Q6K0P9 492 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 FAM71F2Q6NXP2 309 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4L9Q6RFH8 374 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 LINC00173Q6ZV60 143 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 BHLHA15Q7RTS1 189 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 MOB3BQ86TA1 216 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 ZNF546Q86UE3 836 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 CLDN19Q8N6F1 224 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 GATSQ8NAP1 163 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 OR10A7Q8NGE5 316 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 OR1F12Q8NHA8 337 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 FAM110BQ8TC76 370 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 RNF139Q8WU17 664 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 SPRYD4Q8WW59 207 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 HTR3CQ8WXA8 447 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 MRPS31Q92665 395 aaKnown RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 TVP23CQ96ET8 276 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 CLCC1Q96S66 551 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 KLF6Q99612 283 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 RNF5Q99942 180 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 LHX5Q9H2C1 402 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 C12orf10Q9HB07 376 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 SAMSN1Q9NSI8 373 aaKnown RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4Q9UBX2 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 TBK1Q9UHD2 729 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 LAMP5Q9UJQ1 280 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 RPL36Q9Y3U8 105 aaKnown RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 SAMHD1Q9Y3Z3 626 aaKnown RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 THADAQ6YHU6 1953 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 ADGRL1O94910 1474 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 KDRP35968 1356 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 A0A1W2PNN7 141 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 ZNF850A8MQ14 1090 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 C12orf77C9JDV5 145 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 NPIPA7E9PJI5 369 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 INS-IGF2F8WCM5 200 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 SGK1O00141 431 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 XPO1O14980 1071 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 KMOO15229 486 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 MED7O43513 233 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 B3GALNT1O75752 331 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 AP2A1O95782 977 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 CSF3P09919 207 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 ZDHHC11BP0C7U3 371 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 NPIPA8P0DM63 369 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 RPA2P15927 270 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 COX5AP20674 150 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 IMPDH1P20839 514 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 RORAP35398 523 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 SOX6P35712 828 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 CHI3L1P36222 383 aaPredicted RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 TDO2P48775 406 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 CASP4P49662 377 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 FGF8P55075 233 aaPredicted RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 FZD2Q14332 565 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 CYTH1Q15438 398 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 ZSCAN26Q16670 478 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 DUSP7Q16829 419 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 UQCC3Q6UW78 93 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 GET4Q7L5D6 327 aaPredicted RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 NLRP9Q7RTR0 991 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 TRIM69Q86WT6 500 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 CCDC50Q8IVM0 306 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 LGI3Q8N145 548 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 FADS6Q8N9I5 356 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 FNDC5Q8NAU1 212 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 OR2G3Q8NGZ4 309 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 TRMT10AQ8TBZ6 339 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 SDR42E1Q8WUS8 393 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 GEMIN6Q8WXD5 167 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 FAM3CQ92520 227 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 UFD1Q92890 307 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 CXorf40BQ96DE9 158 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 ITCHQ96J02 903 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 TPPP3Q9BW30 176 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 GABARAPL3Q9BY60 117 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 GBA3Q9H227 469 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 TM9SF3Q9HD45 589 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 FARSBQ9NSD9 589 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 CGNQ9P2M7 1197 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 PTBP2Q9UKA9 531 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 KIAA1257Q9ULG3 409 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 NPIPA1Q9UND3 350 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 KCNIP3Q9Y2W7 256 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 TIMM10BQ9Y5J6 103 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 TMEM14AQ9Y6G1 99 aa0.87□□□□□ -2.27
SRP54-207ENST00000555535 BAZ2AQ9UIF9 1905 aaKnown RBP0.87□□□□□ -2.27
SRP54-207ENST00000555535 DENND4AQ7Z401 1863 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 MSH6P52701 1360 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 IGLV3-22A0A075B6J6 115 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 C12orf71A8MTZ7 269 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 J3QKU1 62 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 K7EPI3 171 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms