RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FKBP2P26885 142 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 ACVR1BP36896 505 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 RPS6KA3P51812 740 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 RAC3P60763 192 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 CSNK2A1P68400 391 aaPredicted RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 LGALS3BPQ08380 585 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZP4Q12836 540 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ITGADQ13349 1161 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ANKDD1AQ495B1 522 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 AADACL4Q5VUY2 407 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 OTPQ5XKR4 325 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 TMEM225Q6GV28 225 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZNF585AQ6P3V2 769 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 LYPD4Q6UWN0 246 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SLC35D2Q76EJ3 337 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SHFQ7M4L6 423 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 FAM26EQ8N5C1 309 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZNF519Q8TB69 540 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 HDAC2Q92769 488 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZNF385AQ96PM9 386 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 PRR14LQ5THK1 2151 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ESPL1Q14674 2120 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZNF462Q96JM2 2506 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 ARHGEF9O43307 516 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 TNFAIP8O95379 198 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZNF3P17036 446 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 PTGS2P35354 604 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 AGFG1P52594 562 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 RPL27P61353 136 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZNF91Q05481 1191 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 MRPL49Q13405 166 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 TMEM201Q5SNT2 666 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ARMC4Q5T2S8 1044 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 EEF1A1P5Q5VTE0 462 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 RPTNQ6XPR3 784 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 AHSA2Q719I0 299 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 PXKQ7Z7A4 578 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 CD163Q86VB7 1156 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 UEVLDQ8IX04 471 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 PM20D2Q8IYS1 436 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SYT14Q8NB59 555 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 CPT1CQ8TCG5 803 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 TRUB1Q8WWH5 349 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 ASB10Q8WXI3 467 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 DTNBP1Q96EV8 351 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 FOXN4Q96NZ1 517 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 DDOQ99489 341 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SYT4Q9H2B2 425 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 OR51V1Q9H2C8 321 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 TXNIPQ9H3M7 391 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 RPRD1BQ9NQG5 326 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 TAS2R16Q9NYV7 291 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SH3BGRL2Q9UJC5 107 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 TINAGQ9UJW2 476 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 BAIAP2Q9UQB8 552 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 FAM215AQ9Y5M1 114 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 DIDO1Q9BTC0 2240 aaKnown RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 A0A1W2PRG6 482 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ZNF716A6NP11 495 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 LINC01387J3KSC0 135 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 C1QL1O75973 258 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 TOXO94900 526 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 GPANK1O95872 356 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 TXNDC12O95881 172 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 IGHMP01871 453 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 TPOP07202 933 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ATP6V1B1P15313 513 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 BIDP55957 195 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 FMODQ06828 376 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 IGFBP7Q16270 282 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 BCL2A1Q16548 175 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 KLHL12Q53G59 568 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 CARD17Q5XLA6 110 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 NIPAL3Q6P499 406 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 GFRALQ6UXV0 394 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ADGRE4PQ86SQ3 457 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 SLC43A2Q8N370 569 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 MEIOBQ8N635 442 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ARIH2OSQ8N7S6 290 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ADPRHL1Q8NDY3 354 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 KISS1RQ969F8 398 aaPredicted RBP9.57□□□□□ -0.88
TDP1-211ENST00000555178 TRIB1Q96RU8 372 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 TEX12Q9BXU0 123 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 PRRG3Q9BZD7 231 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 RERGLQ9H628 205 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ZNF696Q9H7X3 374 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 FANCFQ9NPI8 374 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 CLN6Q9NWW5 311 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 ASB6Q9NWX5 421 aa9.57□□□□□ -0.88
TDP1-211ENST00000555178 IGKV1D-43A0A0B4J1Z2 117 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 PRR23D1E9PI22 279 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 MPZL2O60487 215 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 EIF1BO60739 113 aaKnown RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 PRR23D2P0DMB1 279 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 DBTP11182 482 aaKnown RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 APEHP13798 732 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms