RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 BPESC1Q9GZL8 116 aa16.23■□□□□ 0.19
CPSF2-203ENST00000554290 DENND2DQ9H6A0 471 aaPredicted RBP16.23■□□□□ 0.19
CPSF2-203ENST00000554290 MED29Q9NX70 200 aa16.23■□□□□ 0.19
CPSF2-203ENST00000554290 B3GNT2Q9NY97 397 aa16.23■□□□□ 0.19
CPSF2-203ENST00000554290 LEF1Q9UJU2 399 aaPredicted RBP16.23■□□□□ 0.19
CPSF2-203ENST00000554290 CMAHPQ9Y471 501 aa16.23■□□□□ 0.19
CPSF2-203ENST00000554290 STAB1Q9NY15 2570 aa16.23■□□□□ 0.19
CPSF2-203ENST00000554290 TMEM129A0AVI4 362 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 SH3PXD2BA1X283 911 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 PLPP3O14495 311 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 TPST2O60704 377 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 FMO6PO60774 539 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 NR4A1P22736 598 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 RBBP4Q09028 425 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 CYP51A1Q16850 503 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 FAM120AOSQ5T036 256 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 KRT80Q6KB66 452 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 ZNF613Q6PF04 617 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 DLEU7Q6UYE1 221 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 ZNF627Q7L945 461 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 SMYD1Q8NB12 490 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 ATP6V1G3Q96LB4 118 aa16.22■□□□□ 0.19
CPSF2-203ENST00000554290 CPPED1Q9BRF8 314 aaPredicted RBP16.22■□□□□ 0.19
CPSF2-203ENST00000554290 YLPM1P49750 1951 aaKnown RBP16.22■□□□□ 0.19
CPSF2-203ENST00000554290 OR6A2O95222 327 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 C8BP07358 591 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 PIGFQ07326 219 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 CAMK2DQ13557 499 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 TRMT5Q32P41 509 aaKnown RBP16.21■□□□□ 0.19
CPSF2-203ENST00000554290 NHLRC1Q6VVB1 395 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 ZCCHC24Q8N2G6 241 aaKnown RBP16.21■□□□□ 0.19
CPSF2-203ENST00000554290 ZNF786Q8N393 782 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 OR5J2Q8NH18 312 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 FOXB1Q99853 325 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 WFDC6Q9BQY6 131 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 FBXL3Q9UKT7 428 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 NDUFAF1Q9Y375 327 aa16.21■□□□□ 0.19
CPSF2-203ENST00000554290 LRRN3E7EW58 273 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 CHP2O43745 196 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 SERPINI2O75830 405 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 RAB36O95755 333 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 ADRA2AP08913 450 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 ADORA3P0DMS8 318 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 B4GALT1P15291 398 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 CSNK1A1P48729 337 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 EVX1P49640 407 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 CHN2P52757 468 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 PCBP3P57721 371 aaKnown RBP16.2■□□□□ 0.18
CPSF2-203ENST00000554290 LINC00114Q6XXX2 140 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 DHDDSQ86SQ9 333 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 PTOV1Q86YD1 416 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 CDK20Q8IZL9 346 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 UBASH3BQ8TF42 649 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 STON2Q8WXE9 905 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 ARHGDIGQ99819 225 aa16.2■□□□□ 0.18
CPSF2-203ENST00000554290 ANK3Q12955 4377 aaKnown RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 M0QX08 132 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 M0R3H8 397 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 ANGPT2O15123 496 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 SYNGR3O43761 229 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 ENTPD5O75356 428 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 UBL3O95164 117 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 VIMP08670 466 aaKnown RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF14P17017 642 aaPredicted RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 PTDSS1P48651 473 aaKnown RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 BIDP55957 195 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 RAB1AP62820 205 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 DUSP7Q16829 419 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 TTC33Q6PID6 262 aaPredicted RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 UGT2A3Q6UWM9 527 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 IL17RELQ6ZVW7 336 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 PIWIL3Q7Z3Z3 882 aaKnown RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 SLC30A8Q8IWU4 369 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 DPP10Q8N608 796 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 HPS1Q92902 700 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 MRPL24Q96A35 216 aaKnown RBP16.19■□□□□ 0.18
CPSF2-203ENST00000554290 MS4A3Q96HJ5 214 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 CGREF1Q99674 301 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 MS4A5Q9H3V2 200 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 TRIM33Q9UPN9 1127 aa16.19■□□□□ 0.18
CPSF2-203ENST00000554290 LRP5LA4QPB2 252 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 CPSF4LA6NMK7 179 aaKnown RBP16.18■□□□□ 0.18
CPSF2-203ENST00000554290 C11orf98E9PRG8 122 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 OPN1SWP03999 348 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 TACSTD2P09758 323 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF35P13682 527 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 IFNGR1P15260 489 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 LSP1P33241 339 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 RPS23P62266 143 aaKnown RBP16.18■□□□□ 0.18
CPSF2-203ENST00000554290 GALK2Q01415 458 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 ENTPD8Q5MY95 495 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 GKAP1Q5VSY0 366 aaPredicted RBP16.18■□□□□ 0.18
CPSF2-203ENST00000554290 SLC35D2Q76EJ3 337 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 PATL1Q86TB9 770 aaKnown RBP16.18■□□□□ 0.18
CPSF2-203ENST00000554290 OR6T1Q8NGN1 323 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 OR6X1Q8NH79 312 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 SLC26A7Q8TE54 656 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 TSPEARQ8WU66 669 aa16.18■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF75AQ96N20 296 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms