RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 HGFACQ04756 655 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 SNTB2Q13425 540 aaKnown RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CAMK2DQ13557 499 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 TRMT5Q32P41 509 aaKnown RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 INTS11Q5TA45 600 aaKnown RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 DPP10Q8N608 796 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 OR5J2Q8NH18 312 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 RASSF5Q8WWW0 418 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 STON2Q8WXE9 905 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 MAGEB18Q96M61 343 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 FOXN4Q96NZ1 517 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CGREF1Q99674 301 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 SIKE1Q9BRV8 207 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 DENND2DQ9H6A0 471 aaPredicted RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 SEC61A2Q9H9S3 476 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 MED29Q9NX70 200 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CMAHPQ9Y471 501 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 ARFGEF3Q5TH69 2177 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 SH3PXD2BA1X283 911 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 M0R3H8 397 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 PLPP3O14495 311 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 HLA-HP01893 362 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 DAOP14920 347 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 RPS23P62266 143 aaKnown RBP11.04□□□□□ -0.64
LINC00643-202ENST00000553426 PIGFQ07326 219 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 NFYCQ13952 458 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 GKAP1Q5VSY0 366 aaPredicted RBP11.04□□□□□ -0.64
LINC00643-202ENST00000553426 KRT80Q6KB66 452 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 TTC33Q6PID6 262 aaPredicted RBP11.04□□□□□ -0.64
LINC00643-202ENST00000553426 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 HDXQ7Z353 690 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 SVOPLQ8N434 492 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 TSPEARQ8WU66 669 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 TXNDC15Q96J42 360 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 MOGAT1Q96PD6 335 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 ARHGDIGQ99819 225 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 RSPO3Q9BXY4 272 aaPredicted RBP11.04□□□□□ -0.64
LINC00643-202ENST00000553426 CHODLQ9H9P2 273 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 NOX3Q9HBY0 568 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 NANSQ9NR45 359 aa11.04□□□□□ -0.64
LINC00643-202ENST00000553426 ARGLU1Q9NWB6 273 aaPredicted RBP11.04□□□□□ -0.64
LINC00643-202ENST00000553426 CPSF4LA6NMK7 179 aaKnown RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 C11orf98E9PRG8 122 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 RNF13O43567 381 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 TPST2O60704 377 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 UBL3O95164 117 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 OPN1SWP03999 348 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 UMPSP11172 480 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 IFNGR1P15260 489 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 B4GALT1P15291 398 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF23P17027 643 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 SRD5A1P18405 259 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 CD247P20963 164 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 NR4A1P22736 598 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 GIPRP48546 466 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 CHN2P52757 468 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 BIDP55957 195 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 PCBP3P57721 371 aaKnown RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 MTPNP58546 118 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 RAB1AP62820 205 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 DUSP7Q16829 419 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 ENTPD8Q5MY95 495 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 PHYHD1Q5SRE7 291 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF627Q7L945 461 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 PIWIL3Q7Z3Z3 882 aaKnown RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 PTOV1Q86YD1 416 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 VANGL1Q8TAA9 524 aaPredicted RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 ADAMTS16Q8TE57 1224 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 THOC1Q96FV9 657 aaKnown RBP11.03□□□□□ -0.64
LINC00643-202ENST00000553426 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 DOK1Q99704 481 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 FOXB1Q99853 325 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 SH3GL1Q99961 368 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 BPESC1Q9GZL8 116 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 MS4A5Q9H3V2 200 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 MRGBPQ9NV56 204 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 B3GNT2Q9NY97 397 aa11.03□□□□□ -0.64
LINC00643-202ENST00000553426 STAB1Q9NY15 2570 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 IGHV4-61A0A0C4DH41 118 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 A0A0G2JND7 137 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 TRAPPC13A5PLN9 417 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF503-AS2A6NEH8 195 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 LRRN3E7EW58 273 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 SYNGR3O43761 229 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 FARS2O95363 451 aaKnown RBP11.02□□□□□ -0.65
LINC00643-202ENST00000553426 STAMBPO95630 424 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 CH25HO95992 272 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 TGFAP01135 160 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 ADRA2AP08913 450 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 PCGF2P35227 344 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 EVX1P49640 407 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms