RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 LRRC36Q1X8D7 754 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 OLFML2AQ68BL7 652 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 ULK3Q6PHR2 472 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 SLC25A42Q86VD7 318 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 GPR65Q8IYL9 337 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 RDH10Q8IZV5 341 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 SLC39A11Q8N1S5 342 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF596Q8TC21 504 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 LRRC20Q8TCA0 184 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 CA5BP1Q8WTZ4 195 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 PIH1D2Q8WWB5 315 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 TMEM175Q9BSA9 504 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 UCK2Q9BZX2 261 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 ZYG11BQ9C0D3 744 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 OR2AG1Q9H205 316 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 NEUROG2Q9H2A3 272 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 NTN4Q9HB63 628 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 TREM2Q9NZC2 230 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 FLVCR2Q9UPI3 526 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 FLVCR1Q9Y5Y0 555 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 AKNAQ7Z591 1439 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 IGLV3-22A0A075B6J6 115 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 IGHV1OR15-1A0A075B7D0 117 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 IGHV7-81A0A0B4J1V7 117 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 A0A0G2JRQ6 117 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 H7C423 109 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 SIVA1O15304 175 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 HSBP1O75506 76 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 SCELO95171 688 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 CMA1P23946 247 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 UGT1A3P35503 534 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 TNFSF9P41273 254 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 KIR2DS4P43632 304 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ATP12AP54707 1039 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 UGT2B15P54855 530 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 OR2B11Q5JQS5 317 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ANKRD26P1Q6NSI1 321 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 CXCL17Q6UXB2 119 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 BHLHA9Q7RTU4 235 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 CMC1Q7Z7K0 106 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF546Q86UE3 836 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 LHFPL3Q86UP9 236 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 PRR22Q8IZ63 422 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF557Q8N988 423 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-208ENST00000553278 LRRC75AQ8NAA5 344 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 OR51L1Q8NGJ5 315 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 OR5B3Q8NH48 314 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF502Q8TBZ5 544 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ITCHQ96J02 903 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 PELOQ9BRX2 385 aaKnown RBP4.48□□□□□ -1.69
SCFD1-208ENST00000553278 SLC7A5P2Q9GIP4 190 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 PIGUQ9H490 435 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 RNF167Q9H6Y7 350 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 RANBP3Q9H6Z4 567 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-208ENST00000553278 CWH43Q9H720 699 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 SYNDIG1Q9H7V2 258 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 CCDC59Q9P031 241 aaKnown RBP4.48□□□□□ -1.69
SCFD1-208ENST00000553278 ABCD2Q9UBJ2 740 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 KLHL21Q9UJP4 597 aa4.48□□□□□ -1.69
SCFD1-208ENST00000553278 TRAV6A0A075B6T7 132 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 E9PQ18 207 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 MRPS12O15235 138 aaKnown RBP4.47□□□□□ -1.69
SCFD1-208ENST00000553278 KDELR3O43731 214 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 SERPINA5P05154 406 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 MGMTP16455 207 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 HOXB8P17481 243 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-208ENST00000553278 GLP1RP43220 463 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 RGRP47804 291 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-208ENST00000553278 YWHAEP62258 255 aaKnown RBP4.47□□□□□ -1.69
SCFD1-208ENST00000553278 BCL2L1Q07817 233 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 ECH1Q13011 328 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 SLAQ13239 276 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 PGGHGQ32M88 737 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 GPR107Q5VW38 600 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 C1orf94Q6P1W5 598 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 MYOCDQ8IZQ8 938 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 FBXO36Q8NEA4 188 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-208ENST00000553278 MYDGFQ969H8 173 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 ECHDC3Q96DC8 303 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 NAT9Q9BTE0 207 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 TM6SF2Q9BZW4 377 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 EXD2Q9NVH0 621 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 CHMP5Q9NZZ3 219 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 RSPH14Q9UHP6 348 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 LGALS13Q9UHV8 139 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 CNTNAP1P78357 1384 aa4.47□□□□□ -1.69
SCFD1-208ENST00000553278 IGHV3OR16-13A0A075B7E8 117 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 GSTTP1A0A1W2PQM5 241 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 FAM231BA6NCW3 169 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 A6NIZ1 184 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 USP27XA6NNY8 438 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 ZNF99A8MXY4 864 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-208ENST00000553278 H7C0C1 242 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 K7N7A8 449 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 HCRTR1O43613 425 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 FARS2O95363 451 aaKnown RBP4.46□□□□□ -1.7
SCFD1-208ENST00000553278 CXCR2P25025 360 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 AQP1P29972 269 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms